RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 VPS37BQ9H9H4 285 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 COPS7BQ9H9Q2 264 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KCNK13Q9HB14 408 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 INTS10Q9NVR2 710 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OSER1Q9NX31 292 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC39A1Q9NY26 324 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KLF2Q9Y5W3 355 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CACNG2Q9Y698 323 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 UMODL1Q5DID0 1318 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 WDR19Q8NEZ3 1342 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ABCA10Q8WWZ4 1543 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 LOC100653049A0A140TA62 436 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 BLOC1S5-TXNDC5H3BN57 136 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TRDMT1O14717 391 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 LIN7AO14910 233 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CETN3O15182 167 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TSC22D2O75157 780 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 KRT34O76011 436 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 IVLP07476 585 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PABPC4LP0CB38 370 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 THEGLP0DJG4 465 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MYL6BP14649 208 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TCF4P15884 667 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 HNF4AP41235 474 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ACAA2P42765 397 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PDX1P52945 283 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 RPP38P78345 283 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 IL10RBQ08334 325 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MFGE8Q08431 387 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PRKAA1Q13131 559 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 HERC3Q15034 1050 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TAZQ16635 292 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NDUFA5Q16718 116 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 Q3ZCU0 254 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FBXO48Q5FWF7 155 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CLEC6AQ6EIG7 209 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 OR4A47Q6IF82 309 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SLC22A9Q8IVM8 553 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 C12orf56Q8IXR9 622 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ARHGAP24Q8N264 748 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CIARTQ8N365 385 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 RNF10Q8N5U6 811 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 GMCL1P1Q8NEA9 526 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF671Q8TAW3 534 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MIPOL1Q8TD10 442 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 LIPHQ8WWY8 451 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MRPL38Q96DV4 380 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SIPA1Q96FS4 1042 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CNOT6LQ96LI5 555 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 JAKMIP1Q96N16 626 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 UHRF2Q96PU4 802 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FUT8Q9BYC5 575 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NSRP1Q9H0G5 558 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 GBA3Q9H227 469 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 LRRC19Q9H756 370 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CHST11Q9NPF2 352 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NRBP2Q9NSY0 501 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ZDHHC18Q9NUE0 388 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ATAD3AQ9NVI7 634 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PAQR5Q9NXK6 330 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TAS2R3Q9NYW6 316 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MBD2Q9UBB5 411 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 IL19Q9UHD0 177 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CPSF3Q9UKF6 684 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 WDR83OSQ9Y284 106 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 RPH3AQ9Y2J0 694 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 KLK4Q9Y5K2 254 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MIA2Q96PC5 1412 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TTC41PQ6P2S7 1318 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CCDC171Q6TFL3 1326 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PHLPP2Q6ZVD8 1323 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 A0A1B0GVG6 124 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ARPC2O15144 300 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 MAGEB3O15480 346 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FLRT2O43155 660 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 BUB3O43684 328 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ACSL4O60488 711 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NIPSNAP2O75323 286 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SLC16A8O95907 504 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TPM1P09493 284 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FAM58BPP0C7Q3 252 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ELAVL4P26378 380 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CCR1P32246 355 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PSMC4P43686 418 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SULT1E1P49888 294 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PSMD7P51665 324 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SSTP61278 116 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 RGS21Q2M5E4 152 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 KRT39Q6A163 491 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ATL3Q6DD88 541 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FAM166AQ6J272 317 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 UGT3A1Q6NUS8 523 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 GBP6Q6ZN66 633 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ZBTB49Q6ZSB9 765 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NRARPQ7Z6K4 114 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 CUZD1Q86UP6 607 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FAM114A1Q8IWE2 563 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 BBOF1Q8ND07 529 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TTLQ8NG68 377 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms