RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RCN2Q14257 317 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 VWA5B1Q5TIE3 1220 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 FAAH2Q6GMR7 532 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ADAMTS18Q8TE60 1221 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 PPP4R1Q8TF05 950 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 C8orf44Q96CB5 159 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 CCDC126Q96EE4 140 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 KCNC2Q96PR1 638 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 SERINC2Q96SA4 455 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
SLIRP-209ENST00000557342 TBCDQ9BTW9 1192 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 NUDT9Q9BW91 350 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-209ENST00000557342 AICDAQ9GZX7 198 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF700Q9H0M5 742 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ANAPC2Q9UJX6 822 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 MAGEB17A8MXT2 336 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 C4orf51C9J302 202 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 OR7A17O14581 309 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 DPM1O60762 260 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 TBX6O95947 436 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 OTCP00480 354 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 TGFB1P01137 390 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CRHR1P34998 444 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ARFIP1P53367 373 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 PLA2G16P53816 162 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 HERVK_113P63132 956 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 RHAGQ02094 409 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 EEF1A2Q05639 463 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 DDX39BQ13838 428 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CCDC153Q494R4 210 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ADNP2Q6IQ32 1131 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 QSOX2Q6ZRP7 698 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CPEB2Q7Z5Q1 589 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF605Q86T29 641 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 KBTBD2Q8IY47 623 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CYP4X1Q8N118 509 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 MREGQ8N565 214 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 QRFPRQ96P65 431 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ERVK-6Q9BXR3 956 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 LHPPQ9H008 270 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 GRID1Q9ULK0 1009 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
SLIRP-209ENST00000557342 STK38LQ9Y2H1 464 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
SLIRP-209ENST00000557342 CPAMD8Q8IZJ3 1885 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 A0A0G2JN53 185 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 K7EM74 188 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 FOXE1O00358 373 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 CLDN4O14493 209 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 COPEO14579 308 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 DLX3O60479 287 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PRMT3O60678 531 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 B4GALT2O60909 372 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 DNAJB6O75190 326 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 SUPT7LO94864 414 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 MYL2P10916 166 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 KRT4P19013 534 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 NR1D1P20393 614 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 IMPDH1P20839 514 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 TSFMP43897 325 aaKnown RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PRKAA2P54646 552 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 RAB38P57729 211 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 NAA20P61599 178 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 RAPSNQ13702 412 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PCOLCEQ15113 449 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 NSDHLQ15738 373 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 GGTA1PQ4G0N0 100 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 DEPDC1Q5TB30 811 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms