RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	GPR143	P51810	404 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	AP1S2	P56377	157 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	RAB8A	P61006	207 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	REEP5	Q00765	189 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	OC90	Q02509	493 aa	Predicted RBP	10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	RBPJ	Q06330	500 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	C3P1	Q6ZMU1	363 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	QSOX2	Q6ZRP7	698 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CPSF7	Q8N684	471 aa	Known RBP	10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	APCDD1L	Q8NCL9	501 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLC5A11	Q8WWX8	675 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLCO2A1	Q92959	643 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PTCHD1	Q96NR3	888 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	DDX47	Q9H0S4	455 aa	Known RBP	10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ZFAT	Q9P243	1243 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	VWA7	Q9Y334	891 aa		10.44	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SAGE2P	A6NJ88	616 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TMEM200C	A6NKL6	621 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PRMT3	O60678	531 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PRAMEF4	O60810	478 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLC25A12	O75746	678 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SERPIND1	P05546	499 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HIST1H2AD	P20671	130 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PPP2R1B	P30154	601 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PTGER1	P34995	402 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ELK3	P41970	407 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HLCS	P50747	726 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HNRNPF	P52597	415 aa	Known RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ITGA8	P53708	1063 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	RUNX2	Q13950	521 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CSHL1	Q14406	222 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MAPKAPK3	Q16644	382 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	C18orf21	Q32NC0	220 aa	Predicted RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	BBS9	Q3SYG4	887 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PRAMEF9	Q5VWM5	478 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	STEAP4	Q687X5	459 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NXPE4	Q6UWF7	544 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	GDF7	Q7Z4P5	450 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	THOC6	Q86W42	341 aa	Known RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PALM2	Q8IXS6	379 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CA13	Q8N1Q1	262 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLC35F6	Q8N357	371 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TMEM178A	Q8NBL3	297 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TMEM52	Q8NDY8	209 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	AGAP11	Q8TF27	550 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ANKRD49	Q8WVL7	239 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MTFMT	Q96DP5	389 aa	Known RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MAGED4	Q96JG8	741 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HIST1H2AH	Q96KK5	128 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HIST1H2AJ	Q99878	128 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TREX2	Q9BQ50	279 aa	Predicted RBP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MCMBP	Q9BTE3	642 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	H2AFJ	Q9BTM1	129 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SNX12	Q9UMY4	172 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLC22A14	Q9Y267	594 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TEX264	Q9Y6I9	313 aa		10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NIPBL	Q6KC79	2804 aa	eCLIP	10.43	□□□□□ -0.74
HNRNPC-231	ENST00000557336		A8MUA0	341 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CDK2AP1	O14519	115 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PRKN	O60260	465 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CLDN14	O95500	239 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ENO2	P09104	434 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	COX6B1	P14854	86 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ZNF37A	P17032	561 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	JAK1	P23458	1154 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	HNRNPH1	P31943	449 aa	Known RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	RFC3	P40938	356 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	GDF5	P43026	501 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TAS2R39	P59534	338 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ZNF460	Q14592	562 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NAA30	Q147X3	362 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	TESK1	Q15569	626 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CMPK2	Q5EBM0	449 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SLCO4C1	Q6ZQN7	724 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MDGA2	Q7Z553	956 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	VN1R5	Q7Z5H4	357 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SULF2	Q8IWU5	870 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SCUBE1	Q8IWY4	988 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	KLHDC8A	Q8IYD2	350 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	MARVELD2	Q8N4S9	558 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	GPATCH11	Q8N954	259 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NAP1L3	Q99457	506 aa	Predicted RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NAT9	Q9BTE0	207 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ENKD1	Q9H0I2	346 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	RHBG	Q9H310	441 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PELI2	Q9HAT8	420 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CLK4	Q9HAZ1	481 aa	Known RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	PPIE	Q9UNP9	301 aa	Known RBP	10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CHMP2B	Q9UQN3	213 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336	ITPR3	Q14573	2671 aa		10.42	□□□□□ -0.74
HNRNPC-231	ENST00000557336		A0A0G2JN53	185 aa		10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336	NPEPPSL1	A6NEC2	478 aa		10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336		E9PLN8	166 aa		10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336	CES2	O00748	559 aa		10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336	LILRA1	O75019	489 aa		10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336	WISP3	O95389	354 aa	Predicted RBP	10.41	□□□□□ -0.74
HNRNPC-231	ENST00000557336	SERPINA6	P08185	405 aa		10.41	□□□□□ -0.74

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