RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ARMC10Q8N2F6 343 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 MFSD9Q8NBP5 474 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 APCDD1LQ8NCL9 501 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 MFSD3Q96ES6 412 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 CALR3Q96L12 384 aaKnown RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 TCF12Q99081 682 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 SLC30A3Q99726 388 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 CNPPD1Q9BV87 410 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 CCDC68Q9H2F9 335 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 VPS9D1Q9Y2B5 631 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 TLN2Q9Y4G6 2542 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 AVILO75366 819 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 LY6G6DO95868 133 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 MPC1LP0DKB6 136 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 BMP5P22003 454 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 HNF4AP41235 474 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 SKIV2L2P42285 1042 aaKnown RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 CLCN7P51798 805 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 ADARP55265 1226 aaKnown RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 DCAF7P61962 342 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 NKX6-1P78426 367 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 CXXC5Q7LFL8 322 aaKnown RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 PIWIL4Q7Z3Z4 852 aaKnown RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 GPALPP1Q8IXQ4 340 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 TBC1D19Q8N5T2 526 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 NCLNQ969V3 563 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 FAM173AQ9BQD7 235 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 LIN28AQ9H9Z2 209 aaKnown RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 NECTIN3Q9NQS3 549 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
ACTN1-219ENST00000556432 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-219ENST00000556432 IGKV3D-11A0A0A0MRZ8 115 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 GRID2IPA4D2P6 1211 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 CTAGE9A4FU28 777 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 TUBAL3A6NHL2 446 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 GFYI3L273 518 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 SYT5O00445 386 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 AQP7O14520 342 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 DVL2O14641 736 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 LIASO43766 372 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 ZFAND5O76080 213 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 OR6B1O95007 311 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 IGHG3P01860 377 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 CELA3AP09093 270 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 MGAT1P26572 445 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 SOX3P41225 446 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 ASCL1P50553 236 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 CCR8P51685 355 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 BASP1P80723 227 aaKnown RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 PPP2R2BQ00005 443 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 NAE1Q13564 534 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 SNX1Q13596 522 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 PWP1Q13610 501 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 HSPB2Q16082 182 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 MBOAT1Q6ZNC8 495 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 KIAA0408Q6ZU52 694 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 CCDC170Q8IYT3 715 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 SPATA3Q8NHX4 192 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 RNASE6Q93091 150 aaKnown RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 PDLIM2Q96JY6 352 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 SYBUQ9NX95 663 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 ZFATQ9P243 1243 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 PAK5Q9P286 719 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
ACTN1-219ENST00000556432 ATRQ13535 2644 aa12.93□□□□□ -0.34
ACTN1-219ENST00000556432 HIVEP2P31629 2446 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 AP3B1O00203 1094 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 WWP2O00308 870 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 ARHGEF9O43307 516 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 GLSO94925 669 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 GABRA1P14867 456 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 NPY2RP49146 381 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 RAB8AP61006 207 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 SLC10A1Q14973 349 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 ZNF470Q6ECI4 717 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 AGTRAPQ6RW13 159 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 CILP2Q8IUL8 1156 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 PALM2Q8IXS6 379 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 CPNE9Q8IYJ1 553 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 LRRC57Q8N9N7 239 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 RELL2Q8NC24 303 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 C1orf54Q8WWF1 131 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms