RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RNH1P13489 461 aaKnown RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 PLA2G2AP14555 144 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 KRT15P19012 456 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF10P21506 573 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 TGM3Q08188 693 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 RUNX2Q13950 521 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ABRAXAS2Q15018 415 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 NSDHLQ15738 373 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 CPSF6Q16630 551 aaKnown RBP eCLIP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ABHD17CQ6PCB6 329 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 CPEB2Q7Z5Q1 589 aaKnown RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ANKRD37Q7Z713 158 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 KBTBD2Q8IY47 623 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 PLPP5Q8NEB5 264 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 OR52B6Q8NGF0 335 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 OR2W6PQ8NHA6 318 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 HUS1BQ8NHY5 278 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 TSLPQ969D9 159 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 NPLQ9BXD5 320 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 MS4A8Q9BY19 250 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 LHPPQ9H008 270 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 C5AR2Q9P296 337 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 PCDHGA11Q9Y5H2 935 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 COL6A6A6NMZ7 2263 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 PIEZO2Q9H5I5 2752 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 MAGEB17A8MXT2 336 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 FAM227AF5H4B4 570 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 H0YIV9 168 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 DPM1O60762 260 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 SEC24DO94855 1032 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 CLDN9O95484 217 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 GSTA1P08263 222 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 TAC1P20366 129 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 CERS1P27544 350 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 CASRP41180 1078 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 CCNG1P51959 295 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 MTTPP55157 894 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 RASA2Q15283 850 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 NADK2Q4G0N4 442 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 TMEM35AQ53FP2 167 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 AGAP7PQ5VUJ5 663 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 EMBQ6PCB8 327 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 RPS27LQ71UM5 84 aaKnown RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 UBE3DQ7Z6J8 389 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 RNF175Q8N4F7 328 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 L3MBTL4Q8NA19 623 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 SRFBP1Q8NEF9 429 aaKnown RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 REPS1Q96D71 796 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 CMTM7Q96FZ5 175 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 AGAP4Q96P64 663 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 KCNC2Q96PR1 638 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 SERINC2Q96SA4 455 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 MTERF1Q99551 399 aaKnown RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 TUBB6Q9BUF5 446 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 PARD6BQ9BYG5 372 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 OR51B5Q9H339 312 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 COPS7BQ9H9Q2 264 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 ZBTB26Q9HCK0 441 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 SEMA4BQ9NPR2 832 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-217ENST00000556203 PRDM7Q9NQW5 492 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 DCDC2Q9UHG0 476 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 MED13Q9UHV7 2174 aa14.3□□□□□ -0.12
ACTN1-217ENST00000556203 SAP18O00422 153 aaKnown RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 RTCAO00442 366 aaKnown RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 DLX3O60479 287 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 CDH16O75309 829 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 SERPINA7P05543 415 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 CELA2AP08217 269 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 NUDT17P0C025 328 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 PRR35P0CG20 571 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 PIK3CBP42338 1070 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 CDH13P55290 713 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 RAB38P57729 211 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 HERVK_113P63132 956 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 BTG2P78543 158 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 PHEXP78562 749 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TRAF3Q13114 568 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 ZRSR2Q15696 482 aaKnown RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 SFT2D3Q587I9 215 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 KHDRBS2Q5VWX1 349 aaKnown RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 QSOX2Q6ZRP7 698 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 SH2D5Q6ZV89 423 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 CHSY3Q70JA7 882 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 HPS6Q86YV9 775 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 AMER2Q8N7J2 671 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 RBMXL3Q8N7X1 1067 aaKnown RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF483Q8TF39 744 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TM9SF4Q92544 642 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 IMMP1LQ96LU5 166 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 PTCHD1Q96NR3 888 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TBCDQ9BTW9 1192 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 NTMT1Q9BV86 223 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 ERVK-6Q9BXR3 956 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms