RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SPPL2CQ8IUH8 684 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 NFAM1Q8NET5 270 aaPredicted RBP18.46■□□□□ 0.55
PRKCH-219ENST00000555906 VPS39Q96JC1 886 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 SEC16BQ96JE7 1060 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 MCMBPQ9BTE3 642 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 KLHL31Q9H511 634 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 NECTIN3Q9NQS3 549 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 CTNNAL1Q9UBT7 734 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 NPIPA1Q9UND3 350 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 DCHS2Q6V1P9 2916 aa18.46■□□□□ 0.55
PRKCH-219ENST00000555906 ADGRG4Q8IZF6 3080 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 WDR47O94967 919 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 ESRRAP11474 423 aaPredicted RBP18.45■□□□□ 0.54
PRKCH-219ENST00000555906 SMSP52788 366 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 CBLBQ13191 982 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 ZNF227Q86WZ6 799 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 SCUBE1Q8IWY4 988 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 GHDCQ8N2G8 530 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 ADAMTS18Q8TE60 1221 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 ANKRD49Q8WVL7 239 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 RHBDF1Q96CC6 855 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 NPLQ9BXD5 320 aaPredicted RBP18.45■□□□□ 0.54
PRKCH-219ENST00000555906 RHBGQ9H310 441 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 GPAMQ9HCL2 828 aa18.45■□□□□ 0.54
PRKCH-219ENST00000555906 C1GALT1C1LP0DN25 315 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 HLCSP50747 726 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 SLBPQ14493 270 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRKCH-219ENST00000555906 MAPKAPK3Q16644 382 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 TMIGD1Q6UXZ0 262 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 SLCO4C1Q6ZQN7 724 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 GDF7Q7Z4P5 450 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 CEP97Q8IW35 865 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 POGLUT1Q8NBL1 392 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 APCDD1LQ8NCL9 501 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 TMEM125Q96AQ2 219 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 PDLIM2Q96JY6 352 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 DEFB126Q9BYW3 111 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 TRIM31Q9BZY9 425 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 PITHD1Q9GZP4 211 aaPredicted RBP18.44■□□□□ 0.54
PRKCH-219ENST00000555906 DERL2Q9GZP9 239 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 GPRC5BQ9NZH0 403 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 PPIEQ9UNP9 301 aaKnown RBP18.44■□□□□ 0.54
PRKCH-219ENST00000555906 KLF13Q9Y2Y9 288 aaPredicted RBP18.44■□□□□ 0.54
PRKCH-219ENST00000555906 MEMO1Q9Y316 297 aa18.44■□□□□ 0.54
PRKCH-219ENST00000555906 PDZD2O15018 2839 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 A0A088AWK7 358 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 EFCAB8A8MWE9 144 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 ASNA1O43681 348 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 WISP3O95389 354 aaPredicted RBP18.43■□□□□ 0.54
PRKCH-219ENST00000555906 ABOP16442 354 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 ZNF10P21506 573 aaPredicted RBP18.43■□□□□ 0.54
PRKCH-219ENST00000555906 HNRNPH1P31943 449 aaKnown RBP18.43■□□□□ 0.54
PRKCH-219ENST00000555906 CLCN2P51788 898 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 BTN3A2P78410 334 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 TGFBIQ15582 683 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 TCAIMQ8N3R3 496 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 CPSF7Q8N684 471 aaKnown RBP18.43■□□□□ 0.54
PRKCH-219ENST00000555906 B3GNT7Q8NFL0 401 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 MS4A6EQ96DS6 147 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 FAR2Q96K12 515 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 NAPGQ99747 312 aaPredicted RBP18.43■□□□□ 0.54
PRKCH-219ENST00000555906 TMEM79Q9BSE2 394 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 EHD1Q9H4M9 534 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 NT5DC2Q9H857 520 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 SAR1BQ9Y6B6 198 aa18.43■□□□□ 0.54
PRKCH-219ENST00000555906 TRBV11-1A0A0K0K1C0 115 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 LRIT2A6NDA9 550 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 SYNDIG1LA6NDD5 238 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 USP27XA6NNY8 438 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 ERI3O43414 337 aaKnown RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 H2AFYO75367 372 aaKnown RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 CLEC3AO75596 197 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 MYO1DO94832 1006 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 COX6B1P14854 86 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 TFEBP19484 476 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 HPDP32754 393 aaPredicted RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 GDF5P43026 501 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 RPL21P46778 160 aaKnown RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 SLC12A2P55011 1212 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 HSD17B7P56937 341 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 RAB38P57729 211 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 POU4F1Q01851 419 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 C18orf21Q32NC0 220 aaPredicted RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 CHERPQ8IWX8 916 aaKnown RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 ZBED8Q8IZ13 594 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 KRT78Q8N1N4 520 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 PHF10Q8WUB8 498 aaKnown RBP18.42■□□□□ 0.54
PRKCH-219ENST00000555906 VMP1Q96GC9 406 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 CAPS2Q9BXY5 557 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 GRPEL1Q9HAV7 217 aa18.42■□□□□ 0.54
PRKCH-219ENST00000555906 A8MUA0 341 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 B3GALT2O43825 422 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 GGT5P36269 586 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 PAFAH1B1P43034 410 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 GNG11P61952 73 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 RUNX2Q13950 521 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 ADPRMQ3LIE5 342 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 RNFT1Q5M7Z0 435 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 CDKL4Q5MAI5 379 aa18.41■□□□□ 0.54
PRKCH-219ENST00000555906 BBOF1Q8ND07 529 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms