RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ASB1Q9Y576 335 aa17.3■□□□□ 0.36
NEDD1-208ENST00000555806 SCN2AQ99250 2005 aa17.3■□□□□ 0.36
NEDD1-208ENST00000555806 LRIT2A6NDA9 550 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 OR5H15A6NDH6 313 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 FAM227AF5H4B4 570 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 PRAMEF4O60810 478 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ACSL3O95573 720 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 MAOAP21397 527 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 PLA2G16P53816 162 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 SLC26A5P58743 744 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 TAS2R50P59544 299 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 BTG2P78543 158 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 CHIT1Q13231 466 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 LAPTM5Q13571 262 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 HIST2H2ACQ16777 129 aaPredicted RBP17.29■□□□□ 0.36
NEDD1-208ENST00000555806 FAM83EQ2M2I3 478 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 UBAP2Q5T6F2 1119 aaKnown RBP17.29■□□□□ 0.36
NEDD1-208ENST00000555806 PRAMEF9Q5VWM5 478 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 HIST2H2AA3Q6FI13 130 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ADNP2Q6IQ32 1131 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 RPUSD3Q6P087 351 aaKnown RBP17.29■□□□□ 0.36
NEDD1-208ENST00000555806 TRIM40Q6P9F5 258 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 CCDC91Q7Z6B0 441 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ST6GALNAC3Q8NDV1 305 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 FAR1Q8WVX9 515 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 WDR34Q96EX3 536 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 FMO2Q99518 471 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 REXO4Q9GZR2 422 aaKnown RBP17.29■□□□□ 0.36
NEDD1-208ENST00000555806 TSPYL1Q9H0U9 437 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 CDC42EP4Q9H3Q1 356 aaKnown RBP17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ACSS3Q9H6R3 686 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 PRDM9Q9NQV7 894 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 ABI3Q9P2A4 366 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 OPTCQ9UBM4 332 aa17.29■□□□□ 0.36
NEDD1-208ENST00000555806 COL12A1Q99715 3063 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 A0A096LPK6 155 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 SYCE1LA8MT33 242 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 KIF2AO00139 706 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-208ENST00000555806 B3GALT2O43825 422 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 C2P06681 752 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 MYBL2P10244 700 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 EPORP19235 508 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 CD22P20273 847 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 MSH2P43246 934 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 SERPINB8P50452 374 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 MEP1AQ16819 746 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 ACER2Q5QJU3 275 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 VN1R5Q7Z5H4 357 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 CRLF3Q8IUI8 442 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 CENPLQ8N0S6 344 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-208ENST00000555806 BEST3Q8N1M1 668 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 SLC5A8Q8N695 610 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 BCORP1Q8N888 145 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 OR2L5Q8NG80 312 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 SSC4DQ8WTU2 575 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 UBTD2Q8WUN7 234 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 NPLQ9BXD5 320 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-208ENST00000555806 COPS7BQ9H9Q2 264 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-208ENST00000555806 OLAHQ9NV23 265 aa17.28■□□□□ 0.36
NEDD1-208ENST00000555806 ZNF490Q9ULM2 529 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-208ENST00000555806 USP9XQ93008 2570 aaPredicted RBP17.27■□□□□ 0.36
NEDD1-208ENST00000555806 HMX2A2RU54 273 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 A8MUA0 341 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 K7EPI3 171 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 TUBB4AP04350 444 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 INHBAP08476 426 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 PCNAP12004 261 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 GFAPP14136 432 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 TYK2P29597 1187 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 TGM3Q08188 693 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 RUNX2Q13950 521 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 INAQ16352 499 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 H3F3CQ6NXT2 135 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 KLC3Q6P597 504 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 RELL1Q8IUW5 271 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 UBE2E3Q969T4 207 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 VPS11Q9H270 941 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 NECTIN3Q9NQS3 549 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 MMACHCQ9Y4U1 282 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 ANGPTL3Q9Y5C1 460 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.36
NEDD1-208ENST00000555806 TCRBV16S1A1N1A0A5B0 115 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 SAGE2PA6NJ88 616 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 E2F3O00716 465 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 PRAMEF2O60811 474 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 TBX6O95947 436 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-208ENST00000555806 EDN3P14138 238 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 CERS1P27544 350 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 MTTPP55157 894 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 RAB38P57729 211 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 TBCCQ15814 346 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 ADPRMQ3LIE5 342 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 GLE1Q53GS7 698 aaKnown RBP17.26■□□□□ 0.35
NEDD1-208ENST00000555806 ABHD17CQ6PCB6 329 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 TAOK1Q7L7X3 1001 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 KIF2BQ8N4N8 673 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 TEX9Q8N6V9 391 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 FAM47BQ8NA70 645 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 RHEBL1Q8TAI7 183 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms