RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 BCCIPQ9P287 314 aaKnown RBP eCLIP2.51□□□□□ -2.01
SNX6-204ENST00000555541 UBQLN2Q9UHD9 624 aa2.51□□□□□ -2.01
SNX6-204ENST00000555541 TRBV5-4A0A0C4DH59 114 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 TMEM129A0AVI4 362 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 URADA6NGE7 173 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 E5RGE8 158 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 MLNRO43193 412 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 QDPRP09417 244 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 AKR1B1P15121 316 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 PSMA3P25788 255 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 CTNNA2P26232 953 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 CDX1P47902 265 aaPredicted RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 RPL34P49207 117 aaKnown RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 LRRC37A5PQ49AS3 106 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 LBHQ53QV2 105 aaPredicted RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 ZNF542PQ5EBM4 170 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 MUC21Q5SSG8 566 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 TCEAL6Q6IPX3 200 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 KRT80Q6KB66 452 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 C15orf52Q6ZUT6 534 aaKnown RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 FAM219AQ8IW50 185 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 CAMKVQ8NCB2 501 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 OR1B1Q8NGR6 318 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 GRK7Q8WTQ7 553 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 ALKBH3Q96Q83 286 aaPredicted RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 KATNB1Q9BVA0 655 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 PINK1Q9BXM7 581 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 SLC39A8Q9C0K1 460 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 PNNQ9H307 717 aaKnown RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 C10orf88Q9H8K7 445 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 RPF1Q9H9Y2 349 aaKnown RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 DBF4Q9UBU7 674 aaPredicted RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 GTF3C4Q9UKN8 822 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 ZNF346Q9UL40 294 aaKnown RBP2.5□□□□□ -2.01
SNX6-204ENST00000555541 NSG2Q9Y328 171 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 LIPGQ9Y5X9 500 aa2.5□□□□□ -2.01
SNX6-204ENST00000555541 BCLAF3A2AJT9 711 aaKnown RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 PRSS46E5RG02 174 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 NPIPA3F8WFD2 350 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 KBTBD11O94819 623 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 ANGPTL1O95841 491 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 C9P02748 559 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 SSTR1P30872 391 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 RPL9P32969 192 aaKnown RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 OR3A3P47888 321 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 GMPSP49915 693 aaPredicted RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 EVCP57679 992 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 PRPF4BQ13523 1007 aaKnown RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 CCL14Q16627 93 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 LRRC73Q5JTD7 316 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 BTNL8Q6UX41 500 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 Q71RC1 249 aaPredicted RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 BANPQ8N9N5 519 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 CD99L2Q8TCZ2 262 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 BADQ92934 168 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 RUNDC3BQ96NL0 473 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 TNFRSF13CQ96RJ3 184 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 SLF1Q9BQI6 1058 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 MGME1Q9BQP7 344 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 SLC25A23Q9BV35 468 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 C5orf66Q9H5L9 145 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 MRPL11Q9Y3B7 192 aaKnown RBP2.49□□□□□ -2.01
SNX6-204ENST00000555541 KLK4Q9Y5K2 254 aa2.49□□□□□ -2.01
SNX6-204ENST00000555541 IGLON5A6NGN9 336 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 UBE2CO00762 179 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 PGRMC2O15173 223 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 ZNF253O75346 499 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 PENKP01210 267 aaPredicted RBP2.48□□□□□ -2.01
SNX6-204ENST00000555541 SUPT20HL2P0C7V6 817 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 SPP1P10451 314 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 ERCC2P18074 760 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 PPP5CP53041 499 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 IGLV3-21P80748 117 aaPredicted RBP2.48□□□□□ -2.01
SNX6-204ENST00000555541 CALD1Q05682 793 aaKnown RBP2.48□□□□□ -2.01
SNX6-204ENST00000555541 PPA1Q15181 289 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 KYNUQ16719 465 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 UGCGQ16739 394 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 ECSCRQ19T08 205 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 TIMM50Q3ZCQ8 353 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 VWA2Q5GFL6 755 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 OR6J1Q8NGC5 347 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 OR6T1Q8NGN1 323 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 TEX13BQ9BXU2 312 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 SP140LQ9H930 580 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 CUTCQ9NTM9 273 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 RUVBL2Q9Y230 463 aaKnown RBP2.48□□□□□ -2.01
SNX6-204ENST00000555541 NTNG1Q9Y2I2 539 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 SLC6A5Q9Y345 797 aa2.48□□□□□ -2.01
SNX6-204ENST00000555541 LOC390937A0A1W2PQ73 354 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 ANHXE9PGG2 379 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 CCDC188H7C350 402 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 FBP2O00757 339 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 EEF2P13639 858 aaKnown RBP2.47□□□□□ -2.01
SNX6-204ENST00000555541 ATP6V1B1P15313 513 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 CHRNA3P32297 505 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 SPRP35270 261 aaPredicted RBP2.47□□□□□ -2.01
SNX6-204ENST00000555541 CNTN1Q12860 1018 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 TNK1Q13470 666 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 ZNF79Q15937 498 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms