RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SFTPBP07988 381 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 T-ENOLP0DO92 83 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 EZRP15311 586 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 DNAJB1P25685 340 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ITGA3P26006 1051 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 PRDX6P30041 224 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 STIP1P31948 543 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 MAGEA11P43364 429 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 DCDC1P59894 354 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 HERV-K104P63124 156 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 PRKCEQ02156 737 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 GRB14Q14449 540 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ZNF74Q16587 644 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 LRRC37A5PQ49AS3 106 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 FGD3Q5JSP0 725 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ZNF324BQ6AW86 544 aaPredicted RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 IRGCQ6NXR0 463 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ABRAXAS1Q6UWZ7 409 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 OLFM4Q6UX06 510 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ZNF771Q7L3S4 317 aaPredicted RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 TRPT1Q86TN4 253 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 CD99L2Q8TCZ2 262 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 TM9SF4Q92544 642 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 THOC3Q96J01 351 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 LMLNQ96KR4 655 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 C10orf90Q96M02 699 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 COQ7Q99807 217 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 NUSAP1Q9BXS6 441 aaKnown RBP4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ATG10Q9H0Y0 220 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 MARCH7Q9H992 704 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 HACD3Q9P035 362 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 POLKQ9UBT6 870 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 COPS7AQ9UBW8 275 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 NARFQ9UHQ1 456 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 KIAA1217Q5T5P2 1943 aa4.82□□□□□ -1.64
PSEN1-211ENST00000554995 ATP6AP2A0A1C7CYW4 349 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 DENND3A2RUS2 1198 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CYTIPO60759 359 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 NTN1O95631 604 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CAVIN2O95810 425 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 EDN1P05305 212 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 FUT1P19526 365 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 ACAA2P42765 397 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SLC26A5P58743 744 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SSTP61278 116 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 GABPAQ06546 454 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SPP2Q13103 211 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CARTPTQ16568 116 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 ACCSLQ4AC99 568 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SNRNP48Q6IEG0 339 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TCEAL6Q6IPX3 200 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TMEM64Q6YI46 380 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 LEKR1Q6ZMV7 388 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CYP4V2Q6ZWL3 525 aaPredicted RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 ADGRD2Q7Z7M1 963 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 MARVELD2Q8N4S9 558 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TEX26Q8N6G2 289 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 STPG4Q8N801 248 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TCEANCQ8N8B7 351 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 ZNF540Q8NDQ6 660 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 OR56B1Q8NGI3 324 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 OR13C5Q8NGS8 318 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 OR2T11Q8NH01 316 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 GANCQ8TET4 914 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SCARB1Q8WTV0 552 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 GPR137Q96N19 417 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 MEIS3Q99687 375 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 SSX3Q99909 188 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CCSER1Q9C0I3 900 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 ZNF665Q9H7R5 613 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 DDX28Q9NUL7 540 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CNOT2Q9NZN8 540 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 CLIP2Q9UDT6 1046 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TEKT2Q9UIF3 430 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 POMT2Q9UKY4 750 aa4.81□□□□□ -1.64
PSEN1-211ENST00000554995 MRPS2Q9Y399 296 aaKnown RBP4.81□□□□□ -1.64
PSEN1-211ENST00000554995 TMEM89A2RUT3 159 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
PSEN1-211ENST00000554995 EEF2KO00418 725 aaKnown RBP4.8□□□□□ -1.64
PSEN1-211ENST00000554995 KLF11O14901 512 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 NME2P1O60361 137 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 PEX11AO75192 247 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 DIRAS3O95661 229 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 CRYAAP02489 173 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 GSTA2P09210 222 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 SLC2A2P11168 524 aaPredicted RBP4.8□□□□□ -1.64
PSEN1-211ENST00000554995 FGF3P11487 239 aaPredicted RBP4.8□□□□□ -1.64
PSEN1-211ENST00000554995 CEACAM1P13688 526 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 ACKR3P25106 362 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 CTNNA2P26232 953 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 PKLRP30613 574 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 TNFRSF4P43489 277 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 CCL11P51671 97 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 SP3Q02447 781 aa4.8□□□□□ -1.64
PSEN1-211ENST00000554995 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms