RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PPM1MQ96MI6 270 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 CPNE7Q9UBL6 633 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 PABPN1LA6NDY0 278 aaKnown RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 EI24O14681 340 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 SEC22BO75396 215 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 RSL1D1O76021 490 aaKnown RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 LDOC1O95751 146 aaPredicted RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 HIST1H2AGP0C0S8 130 aaPredicted RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 SLC35G4P0C7Q5 338 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 HIST1H2ADP20671 130 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 AP1S2P56377 157 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 CLDN8P56748 225 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 MYBPC3Q14896 1274 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 SYTL3Q4VX76 610 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 AP1ARQ63HQ0 302 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 ERI1Q8IV48 349 aaKnown RBP16.64■□□□□ 0.25
SHOX-204ENST00000554971 DTWD1Q8N5C7 304 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 GLMNQ92990 594 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 HIST1H2AHQ96KK5 128 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 RNF145Q96MT1 663 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 HIST1H2AJQ99878 128 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 H2AFJQ9BTM1 129 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 DLL3Q9NYJ7 618 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 RNF215Q9Y6U7 377 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 KIF26BQ2KJY2 2108 aa16.64■□□□□ 0.25
SHOX-204ENST00000554971 KIR2DS5A0A0G2JLQ3 304 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 A0A0G2JNG1 304 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 KIR2DS3K7RE56 304 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 PGRP06401 933 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 ETS2P15036 469 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 CSRP1P21291 193 aaKnown RBP16.63■□□□□ 0.25
SHOX-204ENST00000554971 ADARB1P78563 741 aaKnown RBP16.63■□□□□ 0.25
SHOX-204ENST00000554971 KIR2DS5Q14953 304 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 ZBED5Q49AG3 693 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 CYBRD1Q53TN4 286 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 PERM1Q5SV97 790 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 ZNF761Q86XN6 746 aaPredicted RBP16.63■□□□□ 0.25
SHOX-204ENST00000554971 L3MBTL4Q8NA19 623 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 FAM110BQ8TC76 370 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 GFM2Q969S9 779 aaKnown RBP16.63■□□□□ 0.25
SHOX-204ENST00000554971 C12orf66Q96MD2 445 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 NRTNQ99748 197 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 RMND5AQ9H871 391 aa16.63■□□□□ 0.25
SHOX-204ENST00000554971 IMP3Q9NV31 184 aaKnown RBP16.63■□□□□ 0.25
SHOX-204ENST00000554971 OR5K4A6NMS3 321 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 H3BSA7 217 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 PLOD2O00469 737 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 GSTA4O15217 222 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 NUDT21O43809 227 aaKnown RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 TRMUO75648 421 aaKnown RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 ALDH3A2P51648 485 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 DGKQP52824 942 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 HHEXQ03014 270 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 CYP4F3Q08477 520 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 NR0B2Q15466 257 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 TRIP6Q15654 476 aaKnown RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 GLRX5Q86SX6 157 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 SVOPLQ8N434 492 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 LIX1Q8N485 282 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ASB11Q8WXH4 323 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 CMTM7Q96FZ5 175 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 MAGIXQ9H6Y5 334 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ACTR8Q9H981 624 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ARL15Q9NXU5 204 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 DNAJB9Q9UBS3 223 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 TSR3Q9UJK0 312 aaKnown RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 PCM1Q15154 2024 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ELOVL7A1L3X0 281 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 GLB1P16278 677 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ACP1P24666 158 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 HALP42357 657 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 GDF5P43026 501 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 FAM174BQ3ZCQ3 159 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 LRIF1Q5T3J3 769 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ZNF438Q7Z4V0 828 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 GPR141Q7Z602 305 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 ZNF786Q8N393 782 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 CYGBQ8WWM9 190 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 TFGQ92734 400 aaPredicted RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 TESCQ96BS2 214 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 AURKBQ96GD4 344 aaPredicted RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 METTL2AQ96IZ6 378 aaKnown RBP16.62■□□□□ 0.25
SHOX-204ENST00000554971 SEPHS2Q99611 448 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 TRIM8Q9BZR9 551 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 LRIT1Q9P2V4 623 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 PDE10AQ9Y233 779 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 CHD8Q9HCK8 2581 aa16.62■□□□□ 0.25
SHOX-204ENST00000554971 PTPRBP23467 1997 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 A0A096LPI6 279 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 TRBV5-3A0A0A0MS03 114 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 MYOCOSA0A1B0GUC4 107 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 DCDC2BA2VCK2 349 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 CPED1A4D0V7 1026 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 GFYI3L273 518 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 TNFSF14O43557 240 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms