RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TMEM132CQ8N3T6 1108 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 LINC01555Q8NAE3 123 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 OR5K2Q8NHB8 316 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 CIDECQ96AQ7 238 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 SIPA1Q96FS4 1042 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 ING2Q9H160 280 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 RMND5AQ9H871 391 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 FGF22Q9HCT0 170 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 POLE4Q9NR33 117 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 PHPT1Q9NRX4 125 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 MAGEL2Q9UJ55 1249 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 KMOO15229 486 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 PRKD3O94806 890 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 GPIP06744 558 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 NUDT7P0C024 238 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 KELP23276 732 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 AQP6Q13520 282 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 ATG9BQ674R7 924 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 ANKRD34AQ69YU3 496 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 HS3ST5Q8IZT8 346 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 CHTF18Q8WVB6 975 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 NELL1Q92832 810 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TESCQ96BS2 214 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 HOXD1Q9GZZ0 328 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TMEM45AQ9NWC5 275 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 EXO1Q9UQ84 846 aaKnown RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 A0A096LPI6 279 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 NOTOA8MTQ0 251 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 AK4P27144 223 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 AQP1P29972 269 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TRIM23P36406 574 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 HNRNPFP52597 415 aaKnown RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 FOXD4Q12950 439 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 KRT33BQ14525 404 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 SPCS2Q15005 226 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 CCDC85BQ15834 202 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 CPTPQ5TA50 214 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TMIGD1Q6UXZ0 262 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 MTSS1LQ765P7 747 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 STK32CQ86UX6 486 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 PROSER1Q86XN7 944 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 ANKFN1Q8N957 763 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 FBXO15Q8NCQ5 510 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 SGCDQ92629 289 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 C11orf24Q96F05 449 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF347Q96SE7 839 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 DUSP26Q9BV47 211 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 C1QTNF2Q9BXJ5 285 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 TP63Q9H3D4 680 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-212ENST00000554467 LTB4R2Q9NPC1 389 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 C5AR2Q9P296 337 aa11.19□□□□□ -0.62
SHMT2-212ENST00000554467 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 GNGT2O14610 69 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 SCAMP2O15127 329 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PPM1DO15297 605 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PLRG1O43660 514 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 SCN2BO60939 215 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ERN1O75460 977 aaKnown RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 BCL10O95999 233 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 SERPINA1P01009 418 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CHRNB1P11230 501 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 BMP2P12643 396 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 TIA1P31483 386 aaKnown RBP eCLIP11.18□□□□□ -0.623e-16■■■□□ 15.8
SHMT2-212ENST00000554467 MTHFRP42898 656 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 TAS2R50P59544 299 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PRSS53Q2L4Q9 553 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 UNC5DQ6UXZ4 953 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MICU2Q8IYU8 434 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 DHRSXQ8N5I4 330 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ANKRD53Q8N9V6 530 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 SMRP1Q8NCR6 262 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CCL4L1Q8NHW4 92 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MAL2Q969L2 176 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 TSACCQ96A04 125 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 TP53INP1Q96A56 240 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PDXPQ96GD0 296 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CENPNQ96H22 339 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MSLNLQ96KJ4 702 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 F2RL3Q96RI0 385 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 SPASTQ9UBP0 616 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ACSL6Q9UKU0 697 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 U3KQV3 271 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 CLIC1O00299 241 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 PI15O43692 258 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF682O95780 498 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 EML2O95834 649 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 MAPK9P45984 424 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 GAB1Q13480 694 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 HIST2H2ACQ16777 129 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-212ENST00000554467 DUOXA1Q1HG43 343 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 HIST2H2AA3Q6FI13 130 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 XAF1Q6GPH4 301 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF852Q6ZMS4 543 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 C17orf64Q86WR6 236 aa11.18□□□□□ -0.62
SHMT2-212ENST00000554467 GALNT13Q8IUC8 556 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms