RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 FIS1Q9Y3D6 152 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 PCDHB3Q9Y5E6 796 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 IGKV3D-11A0A0A0MRZ8 115 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 A0A0G2JND7 137 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 A0A1W2PR48 441 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 A0A1W2PS29 197 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 VSTM2BA6NLU5 285 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 E9PBE3 544 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 FCHO1O14526 889 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 GFRA3O60609 400 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 KLHL41O60662 606 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 KCNK5O95279 499 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 NSA2O95478 260 aaKnown RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 C1QCP02747 245 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 CCL4P13236 92 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 CPOXP36551 454 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 GSTM5P46439 218 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 LIM2P55344 173 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 CLDN8P56748 225 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 VSX2P58304 361 aaPredicted RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 UFM1P61960 85 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 E2F1Q01094 437 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 PTGR1Q14914 329 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 RBBP5Q15291 538 aaKnown RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 ZC3H12BQ5HYM0 836 aaKnown RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 RHBDD2Q6NTF9 364 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 PWWP2BQ6NUJ5 590 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 CYP20A1Q6UW02 462 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 RIPOR1Q6ZS17 1223 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 TMPRSS7Q7RTY8 843 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 RETREG3Q86VR2 466 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 OR9I1Q8NGQ6 314 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 PSMA8Q8TAA3 256 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 SUN3Q8TAQ9 357 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 LRFN5Q96NI6 719 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 C1orf50Q9BV19 199 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 NPLQ9BXD5 320 aaPredicted RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 TEX10Q9NXF1 929 aaPredicted RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 TAS2R7Q9NYW3 318 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 NOP53Q9NZM5 478 aaKnown RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 ZIM2Q9NZV7 527 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 SSUH2Q9Y2M2 353 aa6.4□□□□□ -1.39
LINC00517-202ENST00000554257 POLR3HQ9Y535 204 aaPredicted RBP6.4□□□□□ -1.39
LINC00517-202ENST00000554257 GOLGA4Q13439 2230 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DMXL2Q8TDJ6 3036 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DSCR3O14972 297 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 RECKO95980 971 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 CDK4P11802 303 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 CAPN3P20807 821 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 CERS1P27544 350 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 RPL38P63173 70 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 KRT72Q14CN4 511 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 HERC3Q15034 1050 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 YOD1Q5VVQ6 348 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 BLOC1S3Q6QNY0 202 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 MTDHQ86UE4 582 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 MSRB3Q8IXL7 192 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 KIAA2013Q8IYS2 634 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 LIX1Q8N485 282 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 KRTCAP2Q8N6L1 136 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 ACOT4Q8N9L9 421 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 OR8K5Q8NH50 307 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 FBXO27Q8NI29 283 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DNAJB14Q8TBM8 379 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 HOXB13Q92826 284 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 RGMAQ96B86 450 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 CATSPER2Q96P56 530 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 MAPKAP1Q9BPZ7 522 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 TBCDQ9BTW9 1192 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DDA1Q9BW61 102 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 TGIF2Q9GZN2 237 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SLC26A1Q9H2B4 701 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SLC6A13Q9NSD5 602 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DAPP1Q9UN19 280 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SLC12A4Q9UP95 1085 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 ATG4BQ9Y4P1 393 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 A0A1W2PQ72 361 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 PABPN1LA6NDY0 278 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 H0YIG0 161 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 FXYD1O00168 92 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SCAMP2O15127 329 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DIAPH2O60879 1101 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 PRKRAO75569 313 aaKnown RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 MT-CO3P00414 261 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 ADSLP30566 484 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 ATXN3P54252 364 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 DAB2P98082 770 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 KLF10Q13118 480 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 SQLEQ14534 574 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 IL11RAQ14626 422 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 HIST2H2ACQ16777 129 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-202ENST00000554257 HES3Q5TGS1 186 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
LINC00517-202ENST00000554257 HIST2H2AA3Q6FI13 130 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms