RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RCN3Q96D15 328 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 PPP3R2Q96LZ3 170 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 FOPNLQ96NB1 174 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 CHST8Q9H2A9 424 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 KIR3DX1Q9H7L2 352 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 IPPKQ9H8X2 491 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 SDR39U1Q9NRG7 319 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ARL15Q9NXU5 204 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 STX18Q9P2W9 335 aaKnown RBP15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ADAMTS6Q9UKP5 1117 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 BTRCQ9Y297 605 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 NDUFAF1Q9Y375 327 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ZNF451Q9Y4E5 1061 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.29■□□□□ 0.04
ACTN1-209ENST00000553659 CACNA1DQ01668 2161 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 GFYI3L273 518 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 MEN1O00255 615 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SLC28A1O00337 649 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 TAPBPO15533 448 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 ENTPD5O75356 428 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SLCO2B1O94956 709 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 OR4F21O95013 312 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 RAB40ALP0C0E4 278 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 FOXA1P55317 472 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 ZNF33BQ06732 778 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 HSPA14Q0VDF9 509 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SPATS1Q496A3 300 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 GGTA1PQ4G0N0 100 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 ATP6AP1LQ52LC2 224 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 PDCD4Q53EL6 469 aaKnown RBP15.28■□□□□ 0.04
ACTN1-209ENST00000553659 HIST2H2BCQ6DN03 193 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 DUS1LQ6P1R4 473 aaKnown RBP15.28■□□□□ 0.04
ACTN1-209ENST00000553659 DET1Q7L5Y6 550 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SPDYE1Q8NFV5 336 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SSC4DQ8WTU2 575 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 TMEM79Q9BSE2 394 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 CCM2Q9BSQ5 444 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 NLNQ9BYT8 704 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 TUBB1Q9H4B7 451 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 WDR41Q9HAD4 459 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 CUEDC1Q9NWM3 386 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SOHLH2Q9NX45 425 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 ZIM2Q9NZV7 527 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 COLEC10Q9Y6Z7 277 aa15.28■□□□□ 0.04
ACTN1-209ENST00000553659 SPTAN1Q13813 2472 aaKnown RBP15.28■□□□□ 0.04
ACTN1-209ENST00000553659 IFRD1O00458 451 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 PPP6CO00743 305 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 OR7A17O14581 309 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 LIN7AO14910 233 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 RGS14O43566 566 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 NRP2O60462 931 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 GUCA1CO95843 209 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 CATP04040 527 aaKnown RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 CAPN1P07384 714 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 SLC35G4P0C7Q5 338 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 LINC00032P0C843 101 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 GPX3P22352 226 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 NDUFS1P28331 727 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 ARL1P40616 181 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 HSPA7P48741 367 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 TRAF3Q13114 568 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 BOP1Q14137 746 aaKnown RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 INPP5JQ15735 1006 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 PHKG1Q16816 387 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 PRAMEF17Q5VTA0 474 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 REP15Q6BDI9 236 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 LCN10Q6JVE6 187 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 HPS6Q86YV9 775 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 CDYL2Q8N8U2 506 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 OR4E2Q8NGC2 313 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 CLIP3Q96DZ5 547 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 MARK4Q96L34 752 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 LINC00615Q96LM1 132 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 C3orf30Q96M34 536 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 PPM1MQ96MI6 270 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 KCNA7Q96RP8 456 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 HOPXQ9BPY8 73 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-209ENST00000553659 BRINP2Q9C0B6 783 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 FANCEQ9HB96 536 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 C1GALT1Q9NS00 363 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 AIG1Q9NVV5 245 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 ZNF225Q9UK10 706 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 TCFL5Q9UL49 500 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 SNX7Q9UNH6 387 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 PDE10AQ9Y233 779 aa15.27■□□□□ 0.04
ACTN1-209ENST00000553659 C17orf113A0A1B0GUU1 675 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 ATP6AP2A0A1C7CYW4 349 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 SLC9B1P1A6NJY1 282 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 MRASO14807 208 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 UGDHO60701 494 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 DPM1O60762 260 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 SEMA7AO75326 666 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 ATP6AP2O75787 350 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 KRT6AP02538 564 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 KRT6BP04259 564 aa15.26■□□□□ 0.03
ACTN1-209ENST00000553659 ALDOCP09972 364 aaKnown RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 POLR2CP19387 275 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-209ENST00000553659 CDH3P22223 829 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms