RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZNF329Q86UD4 541 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 SLC22A15Q8IZD6 547 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CCDC185Q8N715 623 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 OR5T2Q8NGG2 359 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 OR8H1Q8NGG4 311 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 HAS2Q92819 552 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 ULK4Q96C45 1275 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 DTD2Q96FN9 168 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 SPATA13Q96N96 652 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF300Q96RE9 604 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CCM2Q9BSQ5 444 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 NTMT1Q9BV86 223 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CLEC7AQ9BXN2 247 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 KRTAP1-5Q9BYS1 174 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 MTIF3Q9H2K0 278 aaKnown RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 FGF22Q9HCT0 170 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 HMG20BQ9P0W2 317 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 DBF4Q9UBU7 674 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 FETUBQ9UGM5 382 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 TRMT6Q9UJA5 497 aaKnown RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 ETV7Q9Y603 341 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 DHX29Q7Z478 1369 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 ATP6AP2A0A1C7CYW4 349 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 SURF4O15260 269 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 P2RX6O15547 441 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 PSMD3O43242 534 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 SYT7O43581 403 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 TLX2O43763 284 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 EDIL3O43854 480 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 MAGEC1O60732 1142 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 CEACAM4O75871 244 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 CHRNGP07510 517 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 UGT1A6P19224 532 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 C4BPBP20851 252 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 EDNRAP25101 427 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 STARD6P59095 220 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 STHQ8IWL8 128 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 TRPV3Q8NET8 790 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 OR4D10Q8NGI6 311 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 OR13C5Q8NGS8 318 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 SPATA18Q8TC71 538 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 SMPDL3AQ92484 453 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 EEF2KMTQ96G04 330 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 CFAP36Q96G28 342 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 RBM4Q9BWF3 364 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 NUSAP1Q9BXS6 441 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 HOXD1Q9GZZ0 328 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF665Q9H7R5 613 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 KCNMB3Q9NPA1 279 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 IL19Q9UHD0 177 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 MOSPD1Q9UJG1 213 aa4.43□□□□□ -1.7
SYNE2-210ENST00000553455 TDRKHQ9Y2W6 561 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 SPAG9O60271 1321 aaKnown RBP4.43□□□□□ -1.7
SYNE2-210ENST00000553455 hCG_38984A0A1B0GV85 526 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 NPIPB9F8W1W9 429 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 TLR4O00206 839 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SIGLEC5O15389 551 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 IGLV1-44P01699 117 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 IGHEP01854 428 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SKILP12757 684 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 B4GALT1P15291 398 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 TYMPP19971 482 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 ACKR3P25106 362 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 MMP12P39900 470 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SLC12A3P55017 1021 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 CASP9P55211 416 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 GFPT1Q06210 699 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 TMEM187Q14656 261 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SPHARQ15513 63 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SGSM1Q2NKQ1 1148 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 ETFRF1Q6IPR1 90 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 TOM1L2Q6ZVM7 507 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 Q6ZVQ6 151 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 C1orf186Q6ZWK4 172 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 CYP4V2Q6ZWL3 525 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF444Q8N0Y2 327 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF619Q8N2I2 560 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SLC43A2Q8N370 569 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SIDT2Q8NBJ9 832 aaKnown RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 CCDC47Q96A33 483 aaKnown RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 GUCD1Q96NT3 240 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 DUX3Q96PT4 197 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 TMEM237Q96Q45 408 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 OVOL2Q9BRP0 275 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 UBAC1Q9BSL1 405 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 ZCCHC3Q9NUD5 404 aaKnown RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 KLHL8Q9P2G9 620 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-210ENST00000553455 PLCL2Q9UPR0 1127 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 CSNK1G3Q9Y6M4 447 aa4.42□□□□□ -1.7
SYNE2-210ENST00000553455 SLC9B1P1A6NJY1 282 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ANHXE9PGG2 379 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 G3V2L1 256 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 SLC28A1O00337 649 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF821O75541 412 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-210ENST00000553455 GAS8O95995 478 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 IGKV3-20P01619 116 aa4.41□□□□□ -1.7
SYNE2-210ENST00000553455 MMP10P09238 476 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms