RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SPATA46Q5T0L3 261 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 CCDC183Q5T5S1 534 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 ARHGEF16Q5VV41 709 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 ZNF776Q68DI1 518 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 SNRNP48Q6IEG0 339 aaKnown RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 CES3Q6UWW8 571 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 CYP4V2Q6ZWL3 525 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 VASH2Q86V25 355 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 SLC43A2Q8N370 569 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 MAPKAPK5-AS1Q8N8E1 139 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 OR13C3Q8NGS6 347 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 OR2T34Q8NGX1 318 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 CTNNBL1Q8WYA6 563 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 THOC3Q96J01 351 aaKnown RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 MAGED4Q96JG8 741 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 RPGRIP1Q96KN7 1286 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 TTC25Q96NG3 672 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 CBWD1Q9BRT8 395 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 OR2B2Q9GZK3 357 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 HPS4Q9NQG7 708 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 YAE1D1Q9NRH1 226 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 C19orf25Q9UFG5 118 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-208ENST00000553278 ETV7Q9Y603 341 aa5.26□□□□□ -1.57
SCFD1-208ENST00000553278 ZNF804BA4D1E1 1349 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ANKRD30BLA7E2S9 258 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 B8ZZF3 427 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 LGALS8O00214 317 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 SOCS2O14508 198 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ADAM12O43184 909 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CYTIPO60759 359 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CTSVO60911 334 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CSO75390 466 aaKnown RBP5.25□□□□□ -1.57
SCFD1-208ENST00000553278 MTX2O75431 263 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 IGHV4-31P0DP07 118 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 DARSP14868 501 aaKnown RBP5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CA6P23280 308 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CDC25AP30304 524 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 OTX2P32243 289 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ALDH3B1P43353 468 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 MYL7Q01449 175 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 IL24Q13007 206 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 GAGE5Q13069 117 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 GAGE6Q13070 117 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 NME3Q13232 169 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ITGA9Q13797 1035 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CEACAM7Q14002 265 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CCDC142Q17RM4 750 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ZNF260Q3ZCT1 412 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 USH1GQ495M9 461 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 GPAT3Q53EU6 434 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 AGKQ53H12 422 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 BOLA3Q53S33 107 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 SLC27A4Q6P1M0 643 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 DHRS11Q6UWP2 260 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 BNIPLQ7Z465 357 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 YRDCQ86U90 279 aaKnown RBP5.25□□□□□ -1.57
SCFD1-208ENST00000553278 CHPT1Q8WUD6 406 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 NCLNQ969V3 563 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 MARK4Q96L34 752 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 C4orf45Q96LM5 186 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 ZNF48Q96MX3 618 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-208ENST00000553278 GORASP2Q9H8Y8 452 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 VIPAS39Q9H9C1 493 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 COG4Q9H9E3 785 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 FANCFQ9NPI8 374 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 RNF186Q9NXI6 227 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 MAN1B1Q9UKM7 699 aa5.25□□□□□ -1.57
SCFD1-208ENST00000553278 A0A1B0GUL7 405 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 ZNF732B4DXR9 585 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 H3BNX3 289 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 TBX19O60806 448 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 HIST1H2AGP0C0S8 130 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 CEACAM1P13688 526 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 PAICSP22234 425 aaKnown RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 TMOD1P28289 359 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 GJB2P29033 226 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 PRDX2P32119 198 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 FUT6P51993 359 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 NLRP11P59045 1033 aaKnown RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 ZXDAP98168 799 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 KEAP1Q14145 624 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 BTG3Q14201 252 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 HEPACAMQ14CZ8 416 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 FGD3Q5JSP0 725 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 STXBP5Q5T5C0 1151 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 C15orf52Q6ZUT6 534 aaKnown RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-208ENST00000553278 NRACQ8N912 160 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 COLGALT1Q8NBJ5 622 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 STKLD1Q8NE28 680 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 GPRC5AQ8NFJ5 357 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 OR7A2PQ8NGA2 310 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 OR6M1Q8NGM8 313 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 PHYHIPQ92561 330 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 HIST1H2ACQ93077 130 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 TUBGCP3Q96CW5 907 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 SLC47A1Q96FL8 570 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 CXorf58Q96LI9 332 aa5.24□□□□□ -1.57
SCFD1-208ENST00000553278 S1PR3Q99500 378 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms