RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR56A3Q8NH54 315 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 NT5CQ8TCD5 201 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 ELP5Q8TE02 316 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 ADAMTS18Q8TE60 1221 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 GRK7Q8WTQ7 553 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 PHF10Q8WUB8 498 aaKnown RBP7.15□□□□□ -1.26
NEK3-201ENST00000550331 ATL1Q8WXF7 558 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 TSLPQ969D9 159 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 LINGO1Q96FE5 620 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 SNF8Q96H20 258 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 MS4A14Q96JA4 679 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 OR4K3Q96R72 315 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 OLFM1Q99784 485 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 NAT9Q9BTE0 207 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 HES7Q9BYE0 225 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 TRIM45Q9H8W5 580 aaPredicted RBP7.15□□□□□ -1.26
NEK3-201ENST00000550331 KLHL1Q9NR64 748 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 IARS2Q9NSE4 1012 aaKnown RBP7.15□□□□□ -1.26
NEK3-201ENST00000550331 ANKRD10Q9NXR5 420 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 ARL15Q9NXU5 204 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 LRFN1Q9P244 771 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 TINAGQ9UJW2 476 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 CORO1CQ9ULV4 474 aaPredicted RBP7.15□□□□□ -1.26
NEK3-201ENST00000550331 MEMO1Q9Y316 297 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 JRKLQ9Y4A0 524 aa7.15□□□□□ -1.26
NEK3-201ENST00000550331 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 GOLGA6L10A0A0M3HER8 536 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 A0A1B0GTL3 188 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ZNF860A6NHJ4 632 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 SAGE2PA6NJ88 616 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 NPIPA5E9PKD4 350 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 FAM227AF5H4B4 570 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 PGRMC1O00264 195 aaKnown RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 NDC80O14777 642 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ASNA1O43681 348 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 NRDCO43847 1150 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 SLC25A12O75746 678 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 TSPAN12O95859 305 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 GABRB3P28472 473 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 TPP2P29144 1249 aaPredicted RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 SSTR2P30874 369 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 TRHRP34981 398 aaPredicted RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 AHRP35869 848 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 SCTRP47872 440 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 CYB561P49447 251 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 IL2P60568 153 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 CCZ1BP86790 482 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 CCZ1P86791 482 aaPredicted RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 CSHL1Q14406 222 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 DEFB134Q4QY38 66 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 RBM20Q5T481 1227 aaKnown RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 RNASEH2BQ5TBB1 312 aaKnown RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 FIGNL1Q6PIW4 674 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ABHD13Q7L211 337 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 GALNTL5Q7Z4T8 443 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 LRRC8AQ8IWT6 810 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 EID3Q8N140 333 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ARMC10Q8N2F6 343 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 GHDCQ8N2G8 530 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 POGLUT1Q8NBL1 392 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ALKBH8Q96BT7 664 aaKnown RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 PYCR2Q96C36 320 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 FBXL8Q96CD0 374 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 MTFMTQ96DP5 389 aaKnown RBP7.14□□□□□ -1.27
NEK3-201ENST00000550331 CERS2Q96G23 380 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 TRIM51Q9BSJ1 452 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 TRIM54Q9BYV2 358 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 CDCP1Q9H5V8 836 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 ZFP69BQ9UJL9 534 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 NPIPA1Q9UND3 350 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 PPP2R2CQ9Y2T4 447 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 FBN3Q75N90 2809 aa7.14□□□□□ -1.27
NEK3-201ENST00000550331 SNRNP200O75643 2136 aaKnown RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 NCOA6Q14686 2063 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 CPAMD8Q8IZJ3 1885 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 IGKV3D-11A0A0A0MRZ8 115 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 TCRBV16S1A1N1A0A5B0 115 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 URADA6NGE7 173 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 E9PLN8 166 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 CES2O00748 559 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 FCHO1O14526 889 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 PRRG2O14669 202 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 CHST10O43529 356 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 NME2P1O60361 137 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 PRMT3O60678 531 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 B4GALT2O60909 372 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 CLDN14O95500 239 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 NADKO95544 446 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 AHSGP02765 367 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 ZNF888P0CJ79 500 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 ABOP16442 354 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 ZNF24P17028 368 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 CAPN3P20807 821 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 NME2P22392 152 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 HLCSP50747 726 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 MLF1P58340 268 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 PPP1R7Q15435 360 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms