RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 GPR22Q99680 433 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 RBBP8Q99708 897 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 EFCAB11Q9BUY7 163 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 RBCK1Q9BYM8 510 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 DEFB126Q9BYW3 111 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 REXO4Q9GZR2 422 aaKnown RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SPNS1Q9H2V7 528 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLHL31Q9H511 634 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 MTO1Q9Y2Z2 717 aaKnown RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLF2Q9Y5W3 355 aaPredicted RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 TCRBV9S1A1TA0A576 114 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 NCF1BA6NI72 391 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 FAM159BA6NKW6 160 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 NCF1CA8MVU1 366 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 HNRNPRO43390 633 aaKnown RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ERI3O43414 337 aaKnown RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZG16O60844 167 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 WISP3O95389 354 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 NCF1P14598 390 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CD1DP15813 335 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 MST1P26927 711 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CRABP2P29373 138 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 SERPINB1P30740 379 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 STX2P32856 288 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 GDF5P43026 501 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CA7P43166 264 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 HLCSP50747 726 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 MTTPP55157 894 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 RAB38P57729 211 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 KCNK10P57789 538 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 MLF1P58340 268 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 RAB10P61026 200 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 BTG2P78543 158 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ART3Q13508 389 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF460Q14592 562 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZKSCAN8Q15776 578 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 TBCCQ15814 346 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ADPRMQ3LIE5 342 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 XKR6Q5GH73 641 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 C1QL3Q5VWW1 255 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 FCRLBQ6BAA4 426 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CAPN12Q6ZSI9 719 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CTAGE3PQ8IX95 158 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF808Q8N4W9 903 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 POGLUT1Q8NBL1 392 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 B3GNT7Q8NFL0 401 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 OR2L5Q8NG80 312 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCT6BQ92526 530 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 KIAA1191Q96A73 305 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 MS4A6EQ96DS6 147 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 WDR34Q96EX3 536 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 UBXN10Q96LJ8 280 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 GPR137Q96N19 417 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 SERINC2Q96SA4 455 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 DPH5Q9H2P9 285 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 RHBGQ9H310 441 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 NMRAL1Q9HBL8 299 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CHST11Q9NPF2 352 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 CD274Q9NZQ7 290 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 PYCARDQ9ULZ3 195 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 PPIEQ9UNP9 301 aaKnown RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 SPACA6W5XKT8 324 aa10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 DIDO1Q9BTC0 2240 aaKnown RBP10.19□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLRC4-KLRK1H3BQV0 150 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCL21O00585 134 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 TAPBPO15533 448 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 RAD51CO43502 376 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLC19A2O60779 497 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 DNAJB6O75190 326 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLC25A12O75746 678 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 NEURL1O76050 574 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 ESRRAP11474 423 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 AGAP20933 346 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 MAOAP21397 527 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 KCNC1P48547 511 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SMSP52788 366 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 PLTPP55058 493 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 ETF1P62495 437 aaKnown RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SRSF11Q05519 484 aaKnown RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLC13A2Q13183 592 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 BIKQ13323 160 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 MAPKAPK3Q16644 382 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 PDK4Q16654 411 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 TMEM35AQ53FP2 167 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SP5Q6BEB4 398 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 XKRXQ6PP77 449 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 BNC2Q6ZN30 1099 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 CEP128Q6ZU80 1094 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 RAPH1Q70E73 1250 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 LRRC70Q7Z2Q7 622 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 TBC1D1Q86TI0 1168 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 GPALPP1Q8IXQ4 340 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 TMEM132CQ8N3T6 1108 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SNX31Q8N9S9 440 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 PDPRQ8NCN5 879 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 NFAM1Q8NET5 270 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms