RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 P2RX2Q9UBL9 471 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 MALT1Q9UDY8 824 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 LSM1O15116 133 aaKnown RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 ASNA1O43681 348 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 B4GALT2O60909 372 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 HOXB6P17509 224 aaKnown RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 GGT1P19440 569 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 LHCGRP22888 699 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 XKP51811 444 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 MRPL58Q14197 206 aaKnown RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 HSF5Q4G112 596 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 C6orf141Q5SZD1 244 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 MPP7Q5T2T1 576 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 RASGEF1AQ8N9B8 481 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 ATP6V1C2Q8NEY4 427 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 CIDECQ96AQ7 238 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 SNTG1Q9NSN8 517 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 STON1Q9Y6Q2 735 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 RFXAPO00287 272 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 CAPN5O15484 640 aaPredicted RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 PENKP01210 267 aaPredicted RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 TFPTP0C1Z6 253 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 MLLT10P55197 1068 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 VBP1P61758 197 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 IQCCQ4KMZ1 466 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 TMEM31Q5JXX7 168 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 LUZP2Q86TE4 346 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 CPXM2Q8N436 756 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 METTL27Q8N6F8 245 aaPredicted RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 SLC2A11Q9BYW1 496 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 TM9SF3Q9HD45 589 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 PCDHB11Q9Y5F2 797 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 CABIN1Q9Y6J0 2220 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 C7orf72A4D263 438 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 TLX2O43763 284 aaPredicted RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 CYP17A1P05093 508 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 KHKP50053 298 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 OLR1P78380 273 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 RAB39AQ14964 217 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 TOMM20Q15388 145 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ZNF311Q5JNZ3 666 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 NXPE4Q6UWF7 544 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 CD300LGQ6UXG3 332 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ATG14Q6ZNE5 492 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ERI1Q8IV48 349 aaKnown RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 ANKFN1Q8N957 763 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 C7orf57Q8NEG2 295 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ZNF563Q8TA94 476 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 GRHL3Q8TE85 626 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ZNF419Q96HQ0 510 aaPredicted RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 TMEM27Q9HBJ8 222 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 PTBP2Q9UKA9 531 aaKnown RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 WNK3Q9BYP7 1800 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 OR7A17O14581 309 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 HIST1H2ABP04908 130 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ALPPP05187 535 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 PABPC4LP0CB38 370 aaKnown RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 CD72P21854 359 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 PRRT3Q5FWE3 981 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 HIST3H2AQ7L7L0 130 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 PIGXQ8TBF5 258 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 HIST1H2ACQ93077 130 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ITFG2Q969R8 447 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 EBF1Q9UH73 591 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 INTS6Q9UL03 887 aaKnown RBP14.41□□□□□ -0.1
CUX1-214ENST00000550008 CLDN25C9JDP6 229 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ZNF195O14628 629 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 AOAHP28039 575 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 CCSMST1Q4G0I0 132 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 REEP3Q6NUK4 255 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 COMMD2Q86X83 199 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 ERVK-18Q9QC07 812 aa14.41□□□□□ -0.1
CUX1-214ENST00000550008 BTN3A3O00478 584 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 DENRO43583 198 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 BMP2P12643 396 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 PSMB5P28074 263 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 MYBPC1Q00872 1141 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 KRR1Q13601 381 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 KCNC3Q14003 757 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 NNATQ16517 81 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 KIAA1614Q5VZ46 1190 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 PDPRQ8NCN5 879 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 ZNF740Q8NDX6 193 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 FEVQ99581 238 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 FAM155AB1AL88 458 aaPredicted RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 SLC16A5O15375 505 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 RPP38P78345 283 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 EIF4HQ15056 248 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 HNRNPA1L2Q32P51 320 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 RBM48Q5RL73 367 aaKnown RBP14.4□□□□□ -0.1
CUX1-214ENST00000550008 TMEM126BQ8IUX1 230 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 TCEANCQ8N8B7 351 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 ZNF480Q8WV37 535 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 RASSF5Q8WWW0 418 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 ASB11Q8WXH4 323 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 ISOC1Q96CN7 298 aa14.4□□□□□ -0.1
CUX1-214ENST00000550008 CWH43Q9H720 699 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms