RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 FGF21Q9NSA1 209 aa16.53■□□□□ 0.24
LETMD1-220ENST00000549686 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
LETMD1-220ENST00000549686 TAGLN3Q9UI15 199 aa16.53■□□□□ 0.24
LETMD1-220ENST00000549686 ASXL3Q9C0F0 2248 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 HYKKA2RU49 373 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 BBIP1A8MTZ0 92 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TMEM150CB9EJG8 249 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 RTCAO00442 366 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 HCRTR1O43613 425 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 B3GALT2O43825 422 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 EEDO75530 441 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 KIAA0754O94854 1291 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 UBOX5O94941 541 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 STATHP02808 62 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 SNRPB2P08579 225 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 FOLR1P15328 257 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 CSRP1P21291 193 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 CALB2P22676 271 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TACR1P25103 407 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 POLR2JP52435 117 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 ARSFP54793 590 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 KCNK10P57789 538 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 RAB8AP61006 207 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 UFM1P61960 85 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 BTN3A2P78410 334 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 BNIP1Q12981 228 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 STX5Q13190 355 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 CYLC2Q14093 348 aaPredicted RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 RCAN2Q14206 197 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 PTGR1Q14914 329 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 HEPACAMQ14CZ8 416 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 ASCL5Q7RTU5 278 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TREML1Q86YW5 311 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TMEM132CQ8N3T6 1108 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 ARHGEF39Q8N4T4 335 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 ZCCHC10Q8TBK6 192 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 NETO1Q8TDF5 533 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 C16orf78Q8WTQ4 265 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TESCQ96BS2 214 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 MTERF3Q96E29 417 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 MVB12AQ96EY5 273 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TSSK3Q96PN8 268 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 TEFMQ96QE5 360 aaKnown RBP16.52■□□□□ 0.24
LETMD1-220ENST00000549686 FAIM2Q9BWQ8 316 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 STRADBQ9C0K7 418 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 ACTL8Q9H568 366 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 CLMPQ9H6B4 373 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 CCDC167Q9P0B6 97 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 PHF11Q9UIL8 331 aa16.52■□□□□ 0.24
LETMD1-220ENST00000549686 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.23
LETMD1-220ENST00000549686 RP1P56715 2156 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 GALR3O60755 368 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 IL6P05231 212 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 FAM58BPP0C7Q3 252 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 ESRRAP11474 423 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 COX4I1P13073 169 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 DRD2P14416 443 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 NME5P56597 212 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 SRSF11Q05519 484 aaKnown RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 KCNAB1Q14722 419 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 GPR19Q15760 415 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 COQ5Q5HYK3 327 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 MRM1Q6IN84 353 aaKnown RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 BLOC1S3Q6QNY0 202 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 ZNF793Q6ZN11 406 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 RIMKLAQ8IXN7 391 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 NATD1Q8N6N6 113 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 ZNF501Q96CX3 271 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 ZNF764Q96H86 408 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 SORBS1Q9BX66 1292 aaKnown RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 LYRM4Q9HD34 91 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 PRDM9Q9NQV7 894 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 MS4A12Q9NXJ0 267 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 SIDT1Q9NXL6 827 aaKnown RBP16.51■□□□□ 0.23
LETMD1-220ENST00000549686 BAIAP2L1Q9UHR4 511 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 SRPK3Q9UPE1 567 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 SPACA6W5XKT8 324 aa16.51■□□□□ 0.23
LETMD1-220ENST00000549686 DMDP11532 3685 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 ASCC3Q8N3C0 2202 aaKnown RBP16.5■□□□□ 0.23
LETMD1-220ENST00000549686 MYO15AQ9UKN7 3530 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 H3BMH7 237 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
LETMD1-220ENST00000549686 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
LETMD1-220ENST00000549686 CFLARO15519 480 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 TBX19O60806 448 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 NSA2O95478 260 aaKnown RBP16.5■□□□□ 0.23
LETMD1-220ENST00000549686 AVPR1BP47901 424 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 RASSF2P50749 326 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 TAS2R50P59544 299 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 KLC1Q07866 573 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 IL11RAQ14626 422 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 DEFB134Q4QY38 66 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 CDCP2Q5VXM1 449 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 FAM71E1Q6IPT2 247 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 FOXR1Q6PIV2 292 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 MSANTD1Q6ZTZ1 278 aa16.5■□□□□ 0.23
LETMD1-220ENST00000549686 CAMKMTQ7Z624 323 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms