RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 MBD3L5A6NJ08 208 aaPredicted RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 CES2O00748 559 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 CLDN4O14493 209 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 ZFAND5O76080 213 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 EPPINO95925 133 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SYF2O95926 243 aaKnown RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 GAS8O95995 478 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SLC35G6P0C7Q6 338 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 ALOX12P18054 663 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 FMO4P31512 558 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SOX3P41225 446 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 DNASE1L1P49184 302 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 GPR143P51810 404 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 ZNF136P52737 540 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 UBASH3AP57075 661 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 TRIM14Q14142 442 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 IQCB1Q15051 598 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 P3H1Q32P28 736 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 PODNL1Q6PEZ8 512 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 FAM47EQ6ZV65 393 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SPNS2Q8IVW8 549 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 REXO1L1PQ8IX06 675 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 FBXW8Q8N3Y1 598 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SMPDL3BQ92485 455 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 NCLNQ969V3 563 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 VMP1Q96GC9 406 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 DACH2Q96NX9 599 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 RASL10BQ96S79 203 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SECISBP2Q96T21 854 aaKnown RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 CHP1Q99653 195 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 AARSD1Q9BTE6 412 aaKnown RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 FAM129AQ9BZQ8 928 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 PRDM9Q9NQV7 894 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 TUBA8Q9NY65 449 aaPredicted RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 PPIEQ9UNP9 301 aaKnown RBP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SH2B3Q9UQQ2 575 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBE2N-203ENST00000549490 TCAF1Q9Y4C2 921 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 PCDHGB3Q9Y5G1 929 aa8.24□□□□□ -1.09
UBE2N-203ENST00000549490 EEF1E1-BLOC1S5C9J1V9 151 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 WWP2O00308 870 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 EEF1E1O43324 174 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 ZNF189O75820 626 aaPredicted RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 IFNA2P01563 188 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 RFPL3SP0C7P2 107 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 CHRM3P20309 590 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 IMPA1P29218 277 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 PPP2R1BP30154 601 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 PTPN7P35236 360 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 TIMP3P35625 211 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SKIV2L2P42285 1042 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 AGFG1P52594 562 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 HADHBP55084 474 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 GDF10P55107 478 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 TERF2Q15554 542 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 ACSF3Q4G176 576 aaPredicted RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 HECTD2Q5U5R9 776 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 RTL4Q6ZR62 310 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 MPP5Q8N3R9 675 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 MFSD9Q8NBP5 474 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 OR8K1Q8NGG5 319 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 PPP1R14CQ8TAE6 165 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SREK1Q8WXA9 508 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 ASB11Q8WXH4 323 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 PEX13Q92968 403 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SCYL1Q96KG9 808 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 DNAJC7Q99615 494 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 CCDC77Q9BR77 488 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SLC6A15Q9H2J7 730 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 CCDC177Q9NQR7 707 aaPredicted RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 CHRAC1Q9NRG0 131 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 PNO1Q9NRX1 252 aaKnown RBP8.23□□□□□ -1.09
UBE2N-203ENST00000549490 JKAMPQ9P055 326 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SAMD15Q9P1V8 674 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 MYOTQ9UBF9 498 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 INTUQ9ULD6 942 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 NPFFR2Q9Y5X5 522 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 HEATR5BQ9P2D3 2071 aa8.23□□□□□ -1.09
UBE2N-203ENST00000549490 SH3D21A4FU49 640 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 AHRRA9YTQ3 701 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 H3BMM5 538 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 GFYI3L273 518 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 PSMD12O00232 456 aaPredicted RBP8.22□□□□□ -1.09
UBE2N-203ENST00000549490 NDUFS4O43181 175 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 WIPF1O43516 503 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 CEP104O60308 925 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 IL2RAP01589 272 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 ZNF888P0CJ79 500 aaPredicted RBP8.22□□□□□ -1.09
UBE2N-203ENST00000549490 CCL3P10147 92 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 RNH1P13489 461 aaKnown RBP8.22□□□□□ -1.09
UBE2N-203ENST00000549490 NID1P14543 1247 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 CYLC1P35663 651 aaPredicted RBP8.22□□□□□ -1.09
UBE2N-203ENST00000549490 TBPL1P62380 186 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 SKP1P63208 163 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 AADACL2Q6P093 401 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
UBE2N-203ENST00000549490 C17orf64Q86WR6 236 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms