RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PRDM9Q9NQV7 894 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 CD274Q9NZQ7 290 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 SEC14L3Q9UDX4 400 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 UTP11Q9Y3A2 253 aaKnown RBP18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 CELSR2Q9HCU4 2923 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 GTF3C1Q12789 2109 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 IGKV3D-11A0A0A0MRZ8 115 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 TRGV8A0A0C4DH27 118 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 A0A1B0GUH1 482 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 TCRBV16S1A1N1A0A5B0 115 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 SAGE2PA6NJ88 616 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 CLGNO14967 610 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 PRAMEF4O60810 478 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 C1QAP02745 245 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 RAB10P61026 200 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 ATP6V0D1P61421 351 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 RUNX2Q13950 521 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 SLMAPQ14BN4 828 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 KBTBD12Q3ZCT8 623 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 PRAMEF9Q5VWM5 478 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 ADNP2Q6IQ32 1131 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 RPS19BP1Q86WX3 136 aaKnown RBP18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 TCAIMQ8N3R3 496 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 TTLQ8NG68 377 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 FBXO25Q8TCJ0 367 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 MS4A6EQ96DS6 147 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 CAPS2Q9BXY5 557 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 TSPAN10Q9H1Z9 355 aaPredicted RBP18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 SH3BGRL2Q9UJC5 107 aa18.32■□□□□ 0.52
SLC48A1-207ENST00000549243 LRIT2A6NDA9 550 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ANKDD1BA6NHY2 528 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 STK16O75716 305 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 GSTA2P09210 222 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 EEF1DP29692 281 aaKnown RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 SPRP35270 261 aaPredicted RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 GGT5P36269 586 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 PLA2G16P53816 162 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ETF1P62495 437 aaKnown RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ZKSCAN8Q15776 578 aaPredicted RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 XKR6Q5GH73 641 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ZNF468Q5VIY5 522 aaPredicted RBP18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 SULT1C3Q6IMI6 304 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 VN1R5Q7Z5H4 357 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 CMC1Q7Z7K0 106 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 RAB17Q9H0T7 212 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 GPRC5BQ9NZH0 403 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 RNF112Q9ULX5 631 aa18.31■□□□□ 0.52
SLC48A1-207ENST00000549243 CCNT2O60583 730 aaKnown RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 S100BP04271 92 aaPredicted RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 CD46P15529 392 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 TPP2P29144 1249 aaPredicted RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 MAGEA4P43358 317 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 KCNC1P48547 511 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 DOC2AQ14183 400 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 EFTUD2Q15029 972 aaKnown RBP eCLIP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 PDK4Q16654 411 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 GRTP1Q5TC63 336 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 ZDHHC24Q6UX98 284 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 RAPH1Q70E73 1250 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 CYS1Q717R9 158 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 GALNTL5Q7Z4T8 443 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 FAM47BQ8NA70 645 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 NFAM1Q8NET5 270 aaPredicted RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 FBF1Q8TES7 1133 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 KIAA1191Q96A73 305 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 SCMH1Q96GD3 660 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 UBXN10Q96LJ8 280 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 ALG9Q9H6U8 611 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 NT5DC2Q9H857 520 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 PRM3Q9NNZ6 103 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 PNO1Q9NRX1 252 aaKnown RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 LRFN1Q9P244 771 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 ZNF490Q9ULM2 529 aaPredicted RBP18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 ASB1Q9Y576 335 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 PCDHGB6Q9Y5F9 930 aa18.3■□□□□ 0.52
SLC48A1-207ENST00000549243 B3GALT2O43825 422 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 CLEC3AO75596 197 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 NEURL1O76050 574 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 MYO1DO94832 1006 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 TBX6O95947 436 aaPredicted RBP18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 TFEBP19484 476 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 CD22P20273 847 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 PPP2R1BP30154 601 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 HNRNPFP52597 415 aaKnown RBP18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 CAV1Q03135 178 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 DLG1Q12959 904 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 CDKL4Q5MAI5 379 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 TRIM40Q6P9F5 258 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 LGI4Q8N135 537 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 TMEM178AQ8NBL3 297 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 PDPRQ8NCN5 879 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 TMEM52Q8NDY8 209 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 THAP3Q8WTV1 239 aaPredicted RBP18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 RELTQ969Z4 430 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 PTCD3Q96EY7 689 aaKnown RBP18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 QRFPRQ96P65 431 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 DEFB126Q9BYW3 111 aa18.29■□□□□ 0.52
SLC48A1-207ENST00000549243 REXO4Q9GZR2 422 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms