RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TESK1Q15569 626 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 TMEM211Q6ICI0 200 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 SBSNQ6UWP8 590 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 ANKRD53Q8N9V6 530 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 ZFP62Q8NB50 900 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-218ENST00000548945 APCDD1LQ8NCL9 501 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 B3GNT7Q8NFL0 401 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 CERS2Q96G23 380 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 MS4A14Q96JA4 679 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 SPNS1Q9H2V7 528 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 ZFATQ9P243 1243 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 PPT2Q9UMR5 302 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 VWA7Q9Y334 891 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 DYRK1BQ9Y463 629 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
PTCH1-218ENST00000548945 AKAP6Q13023 2319 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 GOLGA6L10A0A0M3HER8 536 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 B3GALT4O96024 378 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 IGFBP2P18065 325 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 TFEBP19484 476 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 RAB8AP61006 207 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 STXBP1P61764 594 aaKnown RBP12□□□□□ -0.49
PTCH1-218ENST00000548945 CDKL1Q00532 357 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 TLE4Q04727 773 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 PPP1R3AQ16821 1122 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 TEDDM1Q5T9Z0 273 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 HECTD2Q5U5R9 776 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 FAM45BPQ6NSW5 357 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 NXPE4Q6UWF7 544 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 MEX3BQ6ZN04 569 aaKnown RBP12□□□□□ -0.49
PTCH1-218ENST00000548945 NCCRP1Q6ZVX7 275 aaPredicted RBP12□□□□□ -0.49
PTCH1-218ENST00000548945 THOC6Q86W42 341 aaKnown RBP12□□□□□ -0.49
PTCH1-218ENST00000548945 SULF2Q8IWU5 870 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 TTLQ8NG68 377 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 FAM45AQ8TCE6 357 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 ACTRT1Q8TDG2 376 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 CREB3L4Q8TEY5 395 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 ASB5Q8WWX0 329 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 SDCCAG3Q96C92 435 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 SEC16BQ96JE7 1060 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 TSNARE1Q96NA8 513 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 NPLQ9BXD5 320 aaPredicted RBP12□□□□□ -0.49
PTCH1-218ENST00000548945 NECTIN3Q9NQS3 549 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 KCNE2Q9Y6J6 123 aa12□□□□□ -0.49
PTCH1-218ENST00000548945 FOXO6A8MYZ6 492 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 DNALI1O14645 258 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-218ENST00000548945 PEX1O43933 1283 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 GUCA1CO95843 209 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 GSTM2P28161 218 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 HNMTP50135 292 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 HSD17B7P56937 341 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 CMPK2Q5EBM0 449 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 ARHGAP11AQ6P4F7 1023 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 C3P1Q6ZMU1 363 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 CD163Q86VB7 1156 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 SCUBE1Q8IWY4 988 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 GPALPP1Q8IXQ4 340 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 CA13Q8N1Q1 262 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 TMEM156Q8N614 296 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 SLCO2A1Q92959 643 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 VMP1Q96GC9 406 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 C16orf45Q96MC5 204 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-218ENST00000548945 TP63Q9H3D4 680 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-218ENST00000548945 TIMMDC1Q9NPL8 285 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 RRAGDQ9NQL2 400 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-218ENST00000548945 ITGB1BP2Q9UKP3 347 aa11.99□□□□□ -0.49
PTCH1-218ENST00000548945 YARS2Q9Y2Z4 477 aaKnown RBP11.99□□□□□ -0.49
PTCH1-218ENST00000548945 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 A0A088AWK7 358 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 TRBV11-1A0A0K0K1C0 115 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 A0A1B0GTH9 108 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 CES2O00748 559 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 CLDN4O14493 209 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 ZNHIT1O43257 154 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 HS6ST1O60243 411 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 ITGA10O75578 1167 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 MYO1DO94832 1006 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 TPOP07202 933 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 ZNF37AP17032 561 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-218ENST00000548945 GNAZP19086 355 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 ZNF10P21506 573 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-218ENST00000548945 CHRNB4P30926 498 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 HPDP32754 393 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-218ENST00000548945 HNF4AP41235 474 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 SSR4P51571 173 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 GPR143P51810 404 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 KRTAP10-9P60411 292 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
PTCH1-218ENST00000548945 RBBP5Q15291 538 aaKnown RBP11.98□□□□□ -0.49
PTCH1-218ENST00000548945 TOR1AIP1Q5JTV8 583 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 PAOXQ6QHF9 649 aa11.98□□□□□ -0.49
PTCH1-218ENST00000548945 TMPRSS11BQ86T26 416 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms