RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CKMT1AP12532 417 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF8P17098 575 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CNR2P34972 360 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ASMTP46597 345 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 PTPN5P54829 565 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 C21orf58P58505 322 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GCNT6Q5T4J0 391 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 PTCHD4Q6ZW05 846 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 HSD11B1LQ7Z5J1 315 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ASZ1Q8WWH4 475 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 NEIL2Q969S2 332 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CEP19Q96LK0 163 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 TMEM175Q9BSA9 504 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF282Q9UDV7 671 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 TSPAN6O43657 245 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 UGDHO60701 494 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 IGFBP1P08833 259 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 GJA1P17302 382 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 TNFSF8P32971 234 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCL23P55773 120 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 DEFA1P59665 94 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 DEFA3P59666 94 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 PRSS53Q2L4Q9 553 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 C22orf39Q6P5X5 142 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 Q6ZVL8 140 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 TMPRSS11BQ86T26 416 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CRIPAKQ8N1N5 446 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 C11orf16Q9NQ32 467 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 MKLN1Q9UL63 735 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SH2B3Q9UQQ2 575 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 KLK4Q9Y5K2 254 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 RNASET2O00584 256 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 GADD45GO95257 159 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CHMP24386 653 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 ETV3P41162 512 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC15A1P46059 708 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 OR2B6P58173 313 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 OLR1P78380 273 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 LRRC26Q2I0M4 334 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 AGAP6Q5VW22 663 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 Q6ZVU0 165 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF367Q7RTV3 350 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 MMP21Q8N119 569 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CRELD1Q96HD1 420 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 AGAP4Q96P64 663 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 WDR70Q9NW82 654 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CLEC2DQ9UHP7 191 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCRL2O00421 344 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 LATS1O95835 1130 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 APOA1P02647 267 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 GSTM1P09488 218 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 IMPA1P29218 277 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 HLA-FP30511 346 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 HNF4AP41235 474 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 GJA8P48165 433 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CTSCP53634 463 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CDC42P60953 191 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CDK6Q00534 326 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SYTL3Q4VX76 610 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 WDR53Q7Z5U6 358 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 CAMKMTQ7Z624 323 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 WDR48Q8TAF3 677 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SCLYQ96I15 445 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 VPS35Q96QK1 796 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 PKP4Q99569 1192 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 PIP5K1AQ99755 562 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC30A2Q9BRI3 323 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 NOX1Q9Y5S8 564 aa13.54□□□□□ -0.24
RAPGEF3-218ENST00000548919 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 WWP2O00308 870 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 PLK4O00444 970 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLCO2B1O94956 709 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCNB2O95067 398 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 SOX14O95416 240 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 TGFB1P01137 390 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 PCSK2P16519 638 aa13.53□□□□□ -0.24
RAPGEF3-218ENST00000548919 PDHA2P29803 388 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms