RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NDUFS4O43181 175 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CHST10O43529 356 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 B4GALT2O60909 372 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CRLF1O75462 422 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 TPOP07202 933 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CDH1P12830 882 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 ALOX12P18054 663 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 PTGS2P35354 604 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 COILP38432 576 aaPredicted RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 NKX6-1P78426 367 aaPredicted RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 RHAGQ02094 409 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 SP140Q13342 867 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 PWP1Q13610 501 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 SIX1Q15475 284 aaPredicted RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 PAOXQ6QHF9 649 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 LCTLQ6UWM7 567 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 ARSKQ6UWY0 536 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CHSY3Q70JA7 882 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 ZZZ3Q8IYH5 903 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 TMEM156Q8N614 296 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 AMER2Q8N7J2 671 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 GPATCH11Q8N954 259 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 MCUQ8NE86 351 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 GIMAP7Q8NHV1 300 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CD200R1Q8TD46 325 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 EEF1AKMT1Q8WVE0 214 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 ATL1Q8WXF7 558 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 TSLPQ969D9 159 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 CLK4Q9HAZ1 481 aaKnown RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 LZTFL1Q9NQ48 299 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 IARS2Q9NSE4 1012 aaKnown RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 FBXO5Q9UKT4 447 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 PDE10AQ9Y233 779 aa7.93□□□□□ -1.14
TROAP-208ENST00000548817 KLF13Q9Y2Y9 288 aaPredicted RBP7.93□□□□□ -1.14
TROAP-208ENST00000548817 CHD3Q12873 2000 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 LCMT2O60294 686 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 NME2P1O60361 137 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 CDC40O60508 579 aaKnown RBP eCLIP7.92□□□□□ -1.14
TROAP-208ENST00000548817 GALR3O60755 368 aaPredicted RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 NEURL1O76050 574 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 HAUS5O94927 633 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 GOSR1O95249 250 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 RNH1P13489 461 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 NME2P22392 152 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 TPP2P29144 1249 aaPredicted RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 SLC1A2P43004 574 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 MAGEA6P43360 314 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 KIR2DL3P43628 341 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 HLCSP50747 726 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 EFNA3P52797 238 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 MLF1P58340 268 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 IL2P60568 153 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 CSHL1Q14406 222 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 DEFB134Q4QY38 66 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 HSP90AA5PQ58FG0 334 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 ANKRD22Q5VYY1 191 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 DUPD1Q68J44 220 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 ZNF549Q6P9A3 640 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 PODNL1Q6PEZ8 512 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 FGD2Q7Z6J4 655 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 CAND1Q86VP6 1230 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 PDSS2Q86YH6 399 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 TRIM58Q8NG06 486 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 OR5T3Q8NGG3 340 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 ELP5Q8TE02 316 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 FAM222BQ8WU58 562 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 MAGOHBQ96A72 148 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 SNF8Q96H20 258 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 NAP1L3Q99457 506 aaPredicted RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 NPAS2Q99743 824 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 CCDC77Q9BR77 488 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 AARSD1Q9BTE6 412 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 BDH2Q9BUT1 245 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 RHBGQ9H310 441 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 LANCL2Q9NS86 450 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 ARL15Q9NXU5 204 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 FBXW2Q9UKT8 454 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 DYRK1BQ9Y463 629 aa7.92□□□□□ -1.14
TROAP-208ENST00000548817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.92□□□□□ -1.14
TROAP-208ENST00000548817 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
TROAP-208ENST00000548817 ZCWPW2A0A1B0GU75 182 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 TRBC2A0A5B9 178 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 SAGE2PA6NJ88 616 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 A8MUA0 341 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 H7C1Q1 480 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 WIPF1O43516 503 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 PEX1O43933 1283 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 MAN1A2O60476 641 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 H2AFYO75367 372 aaKnown RBP7.91□□□□□ -1.14
TROAP-208ENST00000548817 IFNA2P01563 188 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 TUBB4AP04350 444 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 F7P08709 466 aaPredicted RBP7.91□□□□□ -1.14
TROAP-208ENST00000548817 CCDC175P0C221 793 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 ZNF888P0CJ79 500 aaPredicted RBP7.91□□□□□ -1.14
TROAP-208ENST00000548817 NPPBP16860 134 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 CXCR5P32302 372 aa7.91□□□□□ -1.14
TROAP-208ENST00000548817 TRHRP34981 398 aaPredicted RBP7.91□□□□□ -1.14
TROAP-208ENST00000548817 HNF4AP41235 474 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms