RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NAA30Q147X3 362 aaPredicted RBP14.85□□□□□ -0.03
DDX54-205ENST00000548786 BTBD16Q32M84 506 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 GTF2H2CQ6P1K8 395 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 MED27Q6P2C8 311 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 TRIM40Q6P9F5 258 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 RPS27LQ71UM5 84 aaKnown RBP14.85□□□□□ -0.03
DDX54-205ENST00000548786 FAM47BQ8NA70 645 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 OR2L5Q8NG80 312 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 TM9SF4Q92544 642 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 PTCHD1Q96NR3 888 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 CDK15Q96Q40 435 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 PITHD1Q9GZP4 211 aaPredicted RBP14.85□□□□□ -0.03
DDX54-205ENST00000548786 ACTR8Q9H981 624 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 COPS7BQ9H9Q2 264 aaPredicted RBP14.85□□□□□ -0.03
DDX54-205ENST00000548786 PLA2G3Q9NZ20 509 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 COPG2Q9UBF2 871 aa14.85□□□□□ -0.03
DDX54-205ENST00000548786 C19orf25Q9UFG5 118 aaPredicted RBP14.85□□□□□ -0.03
DDX54-205ENST00000548786 A8MUA0 341 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 A8MUI8 341 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 B3GALT2O43825 422 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 KLK8O60259 260 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 PRMT3O60678 531 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 SMIM24O75264 130 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 SORBS2O94875 1100 aaKnown RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 RBP1P09455 135 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 SLCO1A2P46721 670 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 PIK3CGP48736 1102 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 OR4D2P58180 307 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 FOXK1P85037 733 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 KCNC4Q03721 635 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 TBCCQ15814 346 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 TSNAXIP1Q2TAA8 658 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 LGSNQ5TDP6 509 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 FCRLBQ6BAA4 426 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 GRHL2Q6ISB3 625 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 NIPAL1Q6NVV3 410 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 ADGRD1Q6QNK2 874 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 ISLR2Q6UXK2 745 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 OR7G3Q8NG95 312 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 CPT1CQ8TCG5 803 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 PNPLA2Q96AD5 504 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 NSUN5Q96P11 429 aaKnown RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 MTERF1Q99551 399 aaKnown RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 TUBB6Q9BUF5 446 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 SORBS1Q9BX66 1292 aaKnown RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 OR51B5Q9H339 312 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 EPS8L2Q9H6S3 715 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 IPPKQ9H8X2 491 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 ANKZF1Q9H8Y5 726 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 PSMC3IPQ9P2W1 217 aaPredicted RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDX54-205ENST00000548786 B3GNT3Q9Y2A9 372 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 RNF11Q9Y3C5 154 aa14.84□□□□□ -0.03
DDX54-205ENST00000548786 V9GYY5 206 aaPredicted RBP14.84□□□□□ -0.03
DDX54-205ENST00000548786 MYOCOSA0A1B0GUC4 107 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 A0A1W2PQ72 361 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 MAGEB17A8MXT2 336 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 E2F3O00716 465 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 PCDH17O14917 1159 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 KLHL41O60662 606 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 TSPAN8P19075 237 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 IL10P22301 178 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 GSTM2P28161 218 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 CASP2P42575 452 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 HNRNPFP52597 415 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 MFAP5Q13361 173 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX54-205ENST00000548786 CPSF6Q16630 551 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX54-205ENST00000548786 FAM219BQ5XKK7 198 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 ABHD17CQ6PCB6 329 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 PAPD4Q6PIY7 484 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 IGFL3Q6UXB1 125 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 CLNKQ7Z7G1 428 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 CUZD1Q86UP6 607 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 EFCAB3Q8N7B9 438 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 TMEM52Q8NDY8 209 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 CATSPER1Q8NEC5 780 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 HUS1BQ8NHY5 278 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 DNAJB14Q8TBM8 379 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 ZNF473Q8WTR7 871 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 PSMF1Q92530 271 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 UBE2E3Q969T4 207 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 ATP6V1E2Q96A05 226 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 IMMP1LQ96LU5 166 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 QRFPRQ96P65 431 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 CSF3RQ99062 836 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 WDR77Q9BQA1 342 aaPredicted RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 MS4A8Q9BY19 250 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 MRPL46Q9H2W6 279 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 NOL11Q9H8H0 719 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 NECTIN3Q9NQS3 549 aa14.83□□□□□ -0.04
DDX54-205ENST00000548786 TNPO3Q9Y5L0 923 aaKnown RBP14.83□□□□□ -0.04
DDX54-205ENST00000548786 A0A088AWK7 358 aa14.82□□□□□ -0.04
DDX54-205ENST00000548786 IQANK1A0A1B0GTG1 560 aa14.82□□□□□ -0.04
DDX54-205ENST00000548786 CCDC189A1A4V9 331 aa14.82□□□□□ -0.04
DDX54-205ENST00000548786 OR7A17O14581 309 aa14.82□□□□□ -0.04
DDX54-205ENST00000548786 COL6A2P12110 1019 aa14.82□□□□□ -0.04
DDX54-205ENST00000548786 ZNF10P21506 573 aaPredicted RBP14.82□□□□□ -0.04
DDX54-205ENST00000548786 MTTPP55157 894 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms