RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TMEM150AQ86TG1 271 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 Q8N9G6 341 aaPredicted RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ELMO1Q92556 727 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 OR2A14Q96R47 310 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC22A12Q96S37 553 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM129BQ96TA1 746 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ARHGAP39Q9C0H5 1083 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 REEP4Q9H6H4 257 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SMURF1Q9HCE7 757 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ITM2CQ9NQX7 267 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ASAH2Q9NR71 780 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 C1GALT1Q9NS00 363 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TAS2R16Q9NYV7 291 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 EXO1Q9UQ84 846 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CENPFP49454 3210 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 KIAA1671Q9BY89 1806 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 GNG14A0A1W2PPG7 69 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ARHGEF33A8MVX0 844 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PCDH17O14917 1159 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 GPX5O75715 221 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 GADD45GO95257 159 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 OLFM2O95897 454 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SCG5P05408 212 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SRCP12931 536 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 RHCEP18577 417 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ENDOUP21128 410 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PRIM2P49643 509 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CRISP1P54107 249 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PNLIPRP1P54315 467 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CDK6Q00534 326 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF630Q2M218 657 aaPredicted RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 BCL7AQ4VC05 210 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF385BQ569K4 471 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 FRMPD2BQ6IN97 320 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TRIM40Q6P9F5 258 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF852Q6ZMS4 543 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PTCHD4Q6ZW05 846 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CPXM2Q8N436 756 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM46DQ8NEK8 389 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 DBF4BQ8NFT6 615 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 OR7G3Q8NG95 312 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 HUS1BQ8NHY5 278 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 WDR36Q8NI36 951 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 NFKBIDQ8NI38 313 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 FIBINQ8TAL6 211 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 OPALINQ96PE5 141 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 OR4K3Q96R72 315 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 KCNS3Q9BQ31 491 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC35A5Q9BS91 424 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CPEB1Q9BZB8 566 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 FZD3Q9NPG1 666 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ERVK13-1Q9NX77 482 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 STOX2Q9P2F5 926 aaPredicted RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 N6AMT1Q9Y5N5 214 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ENPP4Q9Y6X5 453 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 NUP214P35658 2090 aaPredicted RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 THSD7BQ9C0I4 1608 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 A0A1W2PQ67 120 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC35F4A4IF30 521 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 TBKBP1A7MCY6 615 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 CENPBD1B2RD01 187 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 J3KTA2 159 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SGTAO43765 313 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SSX4O60224 188 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 KRT75O95678 551 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 ADRA2AP08913 450 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 TRAPPC2P0DI81 140 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 TRAPPC2BP0DI82 140 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 CD70P32970 193 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 RPL3P39023 403 aaKnown RBP9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 DDOSTP39656 456 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 PCBP3P57721 371 aaKnown RBP9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF763Q0D2J5 394 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 NAE1Q13564 534 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 MPPE1Q53F39 396 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 ATAD3CQ5T2N8 411 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 C6orf183Q5T699 404 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 MEDAGQ5VYS4 303 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 RGMBQ6NW40 437 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM92BQ6ZTR7 304 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 DNAJB7Q7Z6W7 309 aaPredicted RBP9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 TRIM69Q86WT6 500 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC30A8Q8IWU4 369 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 AQP11Q8NBQ7 271 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 OR56A3Q8NH54 315 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 LILRB4Q8NHJ6 448 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 REPS1Q96D71 796 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 WDFY2Q96P53 400 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM83CQ9BQN1 747 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 C14orf119Q9NWQ9 140 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms