RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FBXO48Q5FWF7 155 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 NIPAL1Q6NVV3 410 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 FRA10AC1Q70Z53 315 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 RPS19BP1Q86WX3 136 aaKnown RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 GPSM1Q86YR5 675 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 CTAGE3PQ8IX95 158 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 KIF2BQ8N4N8 673 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 ANKRD7Q92527 254 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF592Q92610 1267 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 CDKL2Q92772 493 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 RELTQ969Z4 430 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 ESAMQ96AP7 390 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 RHBDF1Q96CC6 855 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 FAR2Q96K12 515 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 NPAS2Q99743 824 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 GRIP2Q9C0E4 1043 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 TSPAN10Q9H1Z9 355 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 RHOJQ9H4E5 214 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PELI2Q9HAT8 420 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 TIMMDC1Q9NPL8 285 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 NECTIN3Q9NQS3 549 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 SMYD2Q9NRG4 433 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 NSMCE4AQ9NXX6 385 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 TXNDC16Q9P2K2 825 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 RNF14Q9UBS8 474 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PIKFYVEQ9Y2I7 2098 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 SPENQ96T58 3664 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ARHGAP10A1A4S6 786 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 LRIT2A6NDA9 550 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ANKDD1BA6NHY2 528 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PRSS44E7EML9 344 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 E7ESA3 106 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 NPIPA5E9PKD4 350 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CCL21O00585 134 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CLGNO14967 610 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 FANCGO15287 622 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 TAPBPO15533 448 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SP1P08047 785 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SMIM10L1P0DMW3 83 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 RNH1P13489 461 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 STMN1P16949 149 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PLA2G16P53816 162 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PLTPP55058 493 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 STXBP1P61764 594 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CDKL1Q00532 357 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ALDH6A1Q02252 535 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 RBPJQ06330 500 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 RUNX2Q13950 521 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SLBPQ14493 270 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 TGFBIQ15582 683 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF468Q5VIY5 522 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SLC25A25Q6KCM7 469 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 TMIGD1Q6UXZ0 262 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SLCO4C1Q6ZQN7 724 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 GALNTL5Q7Z4T8 443 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ADAMTSL2Q86TH1 951 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CCDC25Q86WR0 208 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 LURAP1LQ8IV03 231 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 KRT78Q8N1N4 520 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CA13Q8N1Q1 262 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 HORMAD2Q8N7B1 307 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PPM1NQ8N819 430 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SNX31Q8N9S9 440 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 MDS2Q8NDY4 140 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SPATA4Q8NEY3 305 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ELP5Q8TE02 316 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CREB3L4Q8TEY5 395 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 THAP3Q8WTV1 239 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 EXT2Q93063 718 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 SMIM10Q96HG1 83 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 ERP44Q9BS26 406 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CAPS2Q9BXY5 557 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 DEFB126Q9BYW3 111 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 AICDAQ9GZX7 198 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CLK4Q9HAZ1 481 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 POPDC3Q9HBV1 291 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 PNO1Q9NRX1 252 aaKnown RBP6.28□□□□□ -1.4
SCAF11-211ENST00000547950 DNAJC11Q9NVH1 559 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 WWOXQ9NZC7 414 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 CD274Q9NZQ7 290 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 LRFN1Q9P244 771 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 COPG2Q9UBF2 871 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 NPIPA1Q9UND3 350 aa6.28□□□□□ -1.4
SCAF11-211ENST00000547950 NOTCH2Q04721 2471 aa6.27□□□□□ -1.4
SCAF11-211ENST00000547950 MYOCOSA0A1B0GUC4 107 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TCRBV9S1A1TA0A576 114 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TCRBV16S1A1N1A0A5B0 115 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SAGE2PA6NJ88 616 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 C4orf51C9J302 202 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CLDN4O14493 209 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 EIF3HO15372 352 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ZNHIT1O43257 154 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ERI3O43414 337 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms