RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SPIN4Q56A73 249 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 COQ5Q5HYK3 327 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TMTC4Q5T4D3 741 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 FRMPD2BQ6IN97 320 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MICU2Q8IYU8 434 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 KRT78Q8N1N4 520 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 FAM47BQ8NA70 645 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 HLA-CQ95604 372 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TESCQ96BS2 214 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 IL21RQ9HBE5 538 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TMED5Q9Y3A6 229 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 A0A096LPI6 279 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 DLGAP1O14490 977 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 CTSVO60911 334 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MITFO75030 526 aaPredicted RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 E2F6O75461 281 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 PDGFBP01127 241 aaPredicted RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 ETS2P15036 469 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 FOSL2P15408 326 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 CCT8P50990 548 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MANFP55145 182 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MAZP56270 477 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MRPS35P82673 323 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MRPS21P82921 87 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 CHRNB3Q05901 458 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 DUSP2Q05923 314 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 DMWDQ09019 674 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 RPA4Q13156 261 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TP53BP2Q13625 1128 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 DEPDC1Q5TB30 811 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 LCTLQ6UWM7 567 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 PTOV1Q86YD1 416 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 CCDC116Q8IYX3 515 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 TSPEARQ8WU66 669 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 REEP4Q9H6H4 257 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 BRF2Q9HAW0 419 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 PREBQ9HCU5 417 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 MRPS2Q9Y399 296 aaKnown RBP11.4□□□□□ -0.58
CCDC38-202ENST00000546386 ATG4BQ9Y4P1 393 aa11.4□□□□□ -0.58
CCDC38-202ENST00000546386 FRYQ5TBA9 3013 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 A0A1W2PRB8 838 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ACOX3O15254 700 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CHRM5P08912 532 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CTSEP14091 401 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 PTX3P26022 381 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 BSGP35613 385 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 LSSP48449 732 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CRYBA2P53672 197 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 BTN3A2P78410 334 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 FOXM1Q08050 763 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 LRRC74AQ0VAA2 488 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 BLMHQ13867 455 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 DEFB134Q4QY38 66 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 KLHDC8AQ8IYD2 350 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 METTL27Q8N6F8 245 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ZUFSPQ96AP4 578 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CXorf36Q9H7Y0 433 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CTPS2Q9NRF8 586 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 FAF1Q9UNN5 650 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 SH3GLB1Q9Y371 365 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 EP300Q09472 2414 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ARID1BQ8NFD5 2236 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 AQP12BA6NM10 295 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 J3KTA2 159 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ERN1O75460 977 aaKnown RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CDC123O75794 336 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 LDLRP01130 860 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 RPN2P04844 631 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 GLULP15104 373 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 HPCAL1P37235 193 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 GZMMP51124 257 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 VLDLRP98155 873 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 SLAMF1Q13291 335 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 NDUFAF5Q5TEU4 345 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 AQP12AQ8IXF9 295 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 METTL4Q8N3J2 472 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 NFKBIDQ8NI38 313 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 SLC37A2Q8TED4 501 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 SGCDQ92629 289 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 RSC1A1Q92681 617 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 TM4SF18Q96CE8 201 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 REPS1Q96D71 796 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 HAUS8Q9BT25 410 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 MS4A8Q9BY19 250 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 TRIM15Q9C019 465 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 YIPF3Q9GZM5 350 aa11.39□□□□□ -0.59
CCDC38-202ENST00000546386 QRSL1Q9H0R6 528 aaKnown RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 C8orf33Q9H7E9 229 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-202ENST00000546386 ZFHX4Q86UP3 3567 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms