RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ARF3P61204 181 aaPredicted RBP18.5■□□□□ 0.55
SKP2-208ENST00000546211 SLC9A5Q14940 896 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 TRIM61Q5EBN2 209 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 RABL3Q5HYI8 236 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 ZC3H12BQ5HYM0 836 aaKnown RBP18.5■□□□□ 0.55
SKP2-208ENST00000546211 LRIF1Q5T3J3 769 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 FRMPD2BQ6IN97 320 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 DNAJC14Q6Y2X3 702 aaPredicted RBP18.5■□□□□ 0.55
SKP2-208ENST00000546211 ZNF793Q6ZN11 406 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 FAM92BQ6ZTR7 304 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 KCT2Q8NC54 265 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 OR8J3Q8NGG0 315 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 NCSTNQ92542 709 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 ZDHHC12Q96GR4 267 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 ANKRD27Q96NW4 1050 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 GBP5Q96PP8 586 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 PANX1Q96RD7 426 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 MAP3K3Q99759 626 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 SH3GL1Q99961 368 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 CCDC3Q9BQI4 270 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 ROGDIQ9GZN7 287 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 PAIP1Q9H074 479 aaKnown RBP18.5■□□□□ 0.55
SKP2-208ENST00000546211 PRDM7Q9NQW5 492 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 VAPAQ9P0L0 249 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 EPHA6Q9UF33 1036 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 PADI4Q9UM07 663 aa18.5■□□□□ 0.55
SKP2-208ENST00000546211 SNRNP200O75643 2136 aaKnown RBP18.5■□□□□ 0.55
SKP2-208ENST00000546211 LOC105369274A0A096LPK9 316 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 LOC102723532A0A0G2JNH3 316 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 SLC9B1P1A6NJY1 282 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 C4orf51C9J302 202 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 ZSCAN9O15535 394 aaPredicted RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 MAP3K7O43318 606 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 SCN2BO60939 215 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 CER1O95813 267 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 LMNAP02545 664 aaKnown RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 FAM58BPP0C7Q3 252 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 DDCP20711 480 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 EEFSECP57772 596 aaKnown RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 OR1D5P58170 312 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 FLOT2Q14254 428 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 TRIM25Q14258 630 aaKnown RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 SUZ12Q15022 739 aaKnown RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 MANEAQ5SRI9 462 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 SLC23A3Q6PIS1 610 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 OR4N4Q8N0Y3 316 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 ZCCHC7Q8N3Z6 543 aaKnown RBP18.49■□□□□ 0.55
SKP2-208ENST00000546211 ACOT4Q8N9L9 421 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 FAM156AQ8NDB6 213 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 OR8K5Q8NH50 307 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 OR4C6Q8NH72 309 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 JADE3Q92613 823 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 ASB9Q96DX5 294 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 TCTN2Q96GX1 697 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 TGM7Q96PF1 710 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 CD180Q99467 661 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 INPP5KQ9BT40 448 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 NLNQ9BYT8 704 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 RASSF4Q9H2L5 321 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 BTNL2Q9UIR0 455 aa18.49■□□□□ 0.55
SKP2-208ENST00000546211 IGHV1OR21-1A0A087WYE8 117 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 TLCD2A6NGC4 264 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 PATE3B3GLJ2 98 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 RNASET2O00584 256 aaKnown RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 P2RX6O15547 441 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 DUX1O43812 170 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 STAMBPO95630 424 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 CPSF4O95639 269 aaKnown RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 B3GALT4O96024 378 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 EIF2S1P05198 315 aaKnown RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 SYPP08247 313 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 ZNF888P0CJ79 500 aaPredicted RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 HSD17B1P14061 328 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 MSX2P35548 267 aaPredicted RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 SLAMF1Q13291 335 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 NR1D2Q14995 579 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 CCDC6Q16204 474 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 ZNF385BQ569K4 471 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 RUNDC3AQ59EK9 446 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 ABHD13Q7L211 337 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 TICAM1Q8IUC6 712 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 AMER3Q8N944 861 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 OR6C4Q8NGE1 309 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 UTP15Q8TED0 518 aaKnown RBP18.48■□□□□ 0.55
SKP2-208ENST00000546211 MIEF2Q96C03 454 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 CCDC115Q96NT0 180 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 FAIM2Q9BWQ8 316 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 TRIM8Q9BZR9 551 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 ALG2Q9H553 416 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 AP3M1Q9Y2T2 418 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 PCDHB14Q9Y5E9 798 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 KNL1Q8NG31 2342 aa18.48■□□□□ 0.55
SKP2-208ENST00000546211 ARHGAP33O14559 1287 aa18.47■□□□□ 0.55
SKP2-208ENST00000546211 NVLO15381 856 aaKnown RBP18.47■□□□□ 0.55
SKP2-208ENST00000546211 TBX19O60806 448 aa18.47■□□□□ 0.55
SKP2-208ENST00000546211 DNAJA2O60884 412 aa18.47■□□□□ 0.55
SKP2-208ENST00000546211 GSNP06396 782 aa18.47■□□□□ 0.55
SKP2-208ENST00000546211 ZNF10P21506 573 aaPredicted RBP18.47■□□□□ 0.55
SKP2-208ENST00000546211 ALDH9A1P49189 494 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms