RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CCDC190Q86UF4 302 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PTOV1Q86YD1 416 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF280BQ86YH2 543 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 DENND1CQ8IV53 801 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GPR65Q8IYL9 337 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 HS3ST5Q8IZT8 346 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CFAP52Q8N1V2 620 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CPXM2Q8N436 756 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 STX19Q8N4C7 294 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 OXR1Q8N573 874 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 POC5Q8NA72 575 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 OR4C15Q8NGM1 316 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 OR9Q1Q8NGQ5 310 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF675Q8TD23 568 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SGCDQ92629 289 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM63Q969Q1 353 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ESAMQ96AP7 390 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 C11orf24Q96F05 449 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 RPL10LQ96L21 214 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 AGAP4Q96P64 663 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TRNT1Q96Q11 434 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MCCC1Q96RQ3 725 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 DUSP26Q9BV47 211 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 APOL5Q9BWW9 433 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CPEB1Q9BZB8 566 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 REXO4Q9GZR2 422 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 HOXD1Q9GZZ0 328 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 NUAK2Q9H093 628 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CHST8Q9H2A9 424 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TPT1P8Q9HAU6 139 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 DIABLOQ9NR28 239 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CLN6Q9NWW5 311 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 IMPAD1Q9NX62 359 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 VNN3Q9NY84 501 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 RGS17Q9UGC6 210 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 NDOR1Q9UHB4 597 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CPA4Q9UI42 421 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PHF11Q9UIL8 331 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ABCG2Q9UNQ0 655 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 DLGAP4Q9Y2H0 992 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PCDHGB6Q9Y5F9 930 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GBF1Q92538 1859 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 IQCMA0A1B0GVH7 501 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 C1orf226A1L170 272 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MYADML2A6NDP7 307 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SLC22A31A6NKX4 558 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FAM25AB3EWG3 89 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FAM25CB3EWG5 89 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FAM25GB3EWG6 89 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 M0R082 166 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ARVCFO00192 962 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FOXE1O00358 373 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CCRL2O00421 344 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 TNFRSF10CO14798 259 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ZW10O43264 779 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SEC14L5O43304 696 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 COCHO43405 550 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SGTAO43765 313 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MITFO75030 526 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GJB3O75712 270 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 RGS9O75916 674 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SLITRK5O94991 958 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GUCA1CO95843 209 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 DLGAP3O95886 979 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ADAP00813 363 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ASGR1P07306 291 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GAAP10253 952 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ACRP10323 421 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GABRB1P18505 474 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 RHCEP18577 417 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 EPORP19235 508 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 HLA-FP30511 346 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 DDOSTP39656 456 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CASP3P42574 277 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MAGEA10P43363 369 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SLC15A1P46059 708 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MAPK10P53779 464 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 TPTEP56180 551 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 WNT3P56703 355 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SNRPD1P62314 119 aaKnown RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 POLR2LP62875 67 aaKnown RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 KCNJ10P78508 379 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 VLDLRP98155 873 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 IRF8Q02556 426 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CREMQ03060 361 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PPIGQ13427 754 aaKnown RBP eCLIP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CDH18Q13634 790 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 DGCR6Q14129 220 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 NCF4Q15080 339 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 RGNQ15493 299 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CHRNA6Q15825 494 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CCL14Q16627 93 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CPSF6Q16630 551 aaKnown RBP eCLIP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 NDUFA9Q16795 377 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 UGT8Q16880 541 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GTDC1Q4AE62 458 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FBXO48Q5FWF7 155 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 WIPI1Q5MNZ9 446 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms