RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 C10orf62Q5T681 223 aaPredicted RBP11.02□□□□□ -0.64
DDB1-224ENST00000545894 PTCRAQ6ISU1 281 aaPredicted RBP11.02□□□□□ -0.64
DDB1-224ENST00000545894 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.64
DDB1-224ENST00000545894 CLIP4Q8N3C7 705 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 SLC5A8Q8N695 610 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 GPR26Q8NDV2 337 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 DENND6BQ8NEG7 585 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 SPPL2AQ8TCT8 520 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 ASB11Q8WXH4 323 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 Q96MT0 163 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 COPS8Q99627 209 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 CENPOQ9BU64 300 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 DUSP26Q9BV47 211 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 TPK1Q9H3S4 243 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 NEK6Q9HC98 313 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 TMEM184CQ9NVA4 438 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 EHD3Q9NZN3 535 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 VPS29Q9UBQ0 182 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 POFUT2Q9Y2G5 429 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 CAB39Q9Y376 341 aaPredicted RBP11.02□□□□□ -0.64
DDB1-224ENST00000545894 PCDHGA2Q9Y5H1 932 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 KLK4Q9Y5K2 254 aa11.02□□□□□ -0.64
DDB1-224ENST00000545894 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 LOC110117498-PIK3R3F6TDL0 507 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 GFRA2O00451 464 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 RGS13O14921 159 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 KMOO15229 486 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 SOCS5O75159 536 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 PTX3P26022 381 aaPredicted RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 GKP32189 559 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 SOX6P35712 828 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 PTPN5P54829 565 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 HSPA14Q0VDF9 509 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 ST3GAL4Q11206 333 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 IRF3Q14653 427 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 EIF4HQ15056 248 aaKnown RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 SMAD2Q15796 467 aaKnown RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 SLX4IPQ5VYV7 408 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 MMAAQ8IVH4 418 aaKnown RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 Q8N9G6 341 aaPredicted RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 PIK3R3Q92569 461 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 MAL2Q969L2 176 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 RSPRY1Q96DX4 576 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 ASB16Q96NS5 453 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 NUAK2Q9H093 628 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 ZNF226Q9NYT6 803 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 NDUFAF4Q9P032 175 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 SPATA7Q9P0W8 599 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 RUVBL1Q9Y265 456 aaKnown RBP11.02□□□□□ -0.65
DDB1-224ENST00000545894 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.65
DDB1-224ENST00000545894 PRUNE2Q8WUY3 3088 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 C1orf226A1L170 272 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 SCAMP2O15127 329 aaKnown RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 SMAD6O43541 496 aaKnown RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 CCNKO75909 580 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 OR56A5P0C7T3 313 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 HSMCR30P0CW71 290 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 LAMP2P13473 410 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 GABRB1P18505 474 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 WEE1P30291 646 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 MAPK8P45983 427 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 SELENOWP63302 87 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 B4GALNT1Q00973 533 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 ZNF33BQ06732 778 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 ACSM2AQ08AH3 577 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 CDH18Q13634 790 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 RGNQ15493 299 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 TEAD4Q15561 434 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 TOR1AIP1Q5JTV8 583 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDB1-224ENST00000545894 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 RSBN1Q5VWQ0 802 aaPredicted RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 ACSM2BQ68CK6 577 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 RETSATQ6NUM9 610 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 ZNF367Q7RTV3 350 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 TSPAN33Q86UF1 283 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 HJURPQ8NCD3 748 aaPredicted RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 C11orf65Q8NCR3 313 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 OR4C15Q8NGM1 316 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 SMARCD2Q92925 531 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 ALG14Q96F25 216 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 LRRC3BQ96PB8 259 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 TP63Q9H3D4 680 aaPredicted RBP11.01□□□□□ -0.65
DDB1-224ENST00000545894 ITM2CQ9NQX7 267 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 TDP1Q9NUW8 608 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 RLIMQ9NVW2 624 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 NPAP1Q9NZP6 1156 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 STOML2Q9UJZ1 356 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 BTBD3Q9Y2F9 522 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 LEFTY2O00292 366 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 GREM1O60565 184 aa11.01□□□□□ -0.65
DDB1-224ENST00000545894 DNTTP04053 509 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms