RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IL10P22301 178 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 JAK1P23458 1154 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 AVPR1BP47901 424 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 CLNS1AP54105 237 aaKnown RBP15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 SLC9A5Q14940 896 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 KIF26BQ2KJY2 2108 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 HKDC1Q2TB90 917 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 DEFB110Q30KQ9 67 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 HES3Q5TGS1 186 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 RHBDD2Q6NTF9 364 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 MED25Q71SY5 747 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 B3GNT8Q7Z7M8 397 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 NATD1Q8N6N6 113 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 OR1L3Q8NH93 324 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 TSPEARQ8WU66 669 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 APIPQ96GX9 242 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 LRRC37BQ96QE4 947 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 C17orf62Q9BQA9 187 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 MYNNQ9NPC7 610 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 PRDM7Q9NQW5 492 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 IRAK4Q9NWZ3 460 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 HEY2Q9UBP5 337 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 A0A0A6YYD5 115 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 E9PBE3 544 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 DSCR3O14972 297 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 KLHL41O60662 606 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 GALR3O60755 368 aaPredicted RBP15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 PRAMEF10O60809 474 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 KCNK5O95279 499 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 ANXA4P09525 319 aaPredicted RBP15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 PRPS1L1P21108 318 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 ATP5A1P25705 553 aaKnown RBP15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 RPS6KA2Q15349 733 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 TERF2Q15554 542 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 MAPRE2Q15555 327 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 GPR19Q15760 415 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 IL23RQ5VWK5 629 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 IGF2-ASQ6U949 168 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 CYP20A1Q6UW02 462 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 DHRS13Q6UX07 377 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 RAB11FIP2Q7L804 512 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 SLCO6A1Q86UG4 719 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 MIER2Q8N344 545 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 KCT2Q8NC54 265 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 RCBTB1Q8NDN9 531 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 PPP1R36Q96LQ0 422 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 OR6C1Q96RD1 312 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 FAIM2Q9BWQ8 316 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 ZNF385DQ9H6B1 395 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 SYNPO2LQ9H987 977 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 CUTCQ9NTM9 273 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 EHD3Q9NZN3 535 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 LOXL2Q9Y4K0 774 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 GPR45Q9Y5Y3 372 aa15.21■□□□□ 0.02
PRPF40A-212ENST00000545856 DMXL1Q9Y485 3027 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 A0A1B0GX78 115 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 GNG14A0A1W2PPG7 69 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 EFCAB7A8K855 629 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 TBX19O60806 448 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 ONECUT2O95948 504 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 ALDOCP09972 364 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 ZNF888P0CJ79 500 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 PIM1P11309 404 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 BCKDHAP12694 445 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 DRD2P14416 443 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 SDC1P18827 310 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 TPP2P29144 1249 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 MAPK12P53778 367 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 PLA2G16P53816 162 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 KCNAB1Q14722 419 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 HEPACAMQ14CZ8 416 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 CCNYL2Q5T2Q4 361 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 TMEM164Q5U3C3 297 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 MRM1Q6IN84 353 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 R3HCC1LQ7Z5L2 792 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 UBE3DQ7Z6J8 389 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 RNF175Q8N4F7 328 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 ACOT4Q8N9L9 421 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 C10orf90Q96M02 699 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 TAAR9Q96RI9 348 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 AICDAQ9GZX7 198 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 POLR3HQ9Y535 204 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 PCDHGA8Q9Y5G5 932 aa15.2■□□□□ 0.02
PRPF40A-212ENST00000545856 PLD2O14939 933 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 HCRTR1O43613 425 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 CPNE3O75131 537 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 CYC1P08574 325 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 CD63P08962 238 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 TLX1P31314 330 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 HPCAL1P37235 193 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 BUD31P41223 144 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 CLDN8P56748 225 aa15.19■□□□□ 0.02
PRPF40A-212ENST00000545856 RAE1P78406 368 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms