RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FGF4P08620 206 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PRKACGP22612 351 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ETV4P43268 484 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PPP2R2DQ66LE6 453 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF550Q7Z398 422 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 C1orf216Q8TAB5 229 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 MVB12BQ9H7P6 319 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 FBXL12Q9NXK8 326 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 MYH8P13535 1937 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RUNDC3AQ59EK9 446 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ARL9Q6T311 187 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 BRD7Q9NPI1 651 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF224Q9NZL3 707 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF639Q9UID6 485 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PCTPQ9UKL6 214 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 TBC1D24Q9ULP9 559 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 NDRG2Q9UN36 371 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 STC2O76061 302 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 SNAP29O95721 258 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 CCL5P13501 91 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 DRD2P14416 443 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RHCEP18577 417 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 KDELR2P33947 212 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 LY6G5CQ5SRR4 150 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 OR2L5Q8NG80 312 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 CREB3L1Q96BA8 519 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 GJB5O95377 273 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RLN2P04090 185 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ENDOUP21128 410 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 CREB5Q02930 508 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 OR4D1Q15615 310 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RAB30Q15771 203 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 TMEM35AQ53FP2 167 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 RANBP10Q6VN20 620 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 KBTBD6Q86V97 674 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ATP6V1C2Q8NEY4 427 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PNO1Q9NRX1 252 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 MARCH4Q9P2E8 410 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 EIF3KQ9UBQ5 218 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 AP1M2Q9Y6Q5 423 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 SCAMP2O15127 329 aaKnown RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 LEFTY1O75610 366 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 GNSP15586 552 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 EPCAMP16422 314 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 GSTM2P28161 218 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 PREPP48147 710 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ACTC1P68032 377 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ACTA1P68133 377 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 VLDLRP98155 873 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ABRAXAS2Q15018 415 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 NPWQ8N729 165 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ARNTL2Q8WYA1 636 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 TMED9Q9BVK6 235 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 HHATLQ9HCP6 504 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 WDR45Q9Y484 360 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 KCNJ13O60928 360 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF865P0CJ78 1059 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ELK4P28324 431 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 YIPF7Q8N8F6 280 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 CEP76Q8TAP6 659 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF689Q96CS4 500 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 CHP2O43745 196 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 GMFGO60234 142 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 UGDHO60701 494 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF821O75541 412 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 CLCA4Q14CN2 919 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 SEC23BQ15437 767 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 PSAPL1Q6NUJ1 521 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 UNC5DQ6UXZ4 953 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 SUN3Q8TAQ9 357 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 FANK1Q8TC84 345 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 RBMX2Q9Y388 322 aaKnown RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 DNAJC15Q9Y5T4 150 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 MYH7P12883 1935 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 AK1P00568 194 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 STOMP27105 288 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 GJA8P48165 433 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 C12orf40Q86WS4 652 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 CARM1Q86X55 608 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 CENPSQ8N2Z9 138 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 OR4K14Q8NGD5 310 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 OR51I1Q9H343 314 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 FAM118AQ9NWS6 357 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 SOBPA7XYQ1 873 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 GJA1P17302 382 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 KCNC1P48547 511 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 PHC1P78364 1004 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 POU4F2Q12837 409 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 EIF4HQ15056 248 aaKnown RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF782Q6ZMW2 699 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-209ENST00000545689 Q6ZVL8 140 aa12.06□□□□□ -0.48
COL4A6-209ENST00000545689 UTS2BQ765I0 119 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms