RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 E7EQ34 232 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CTDSP2O14595 271 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 HOXC11O43248 304 aaPredicted RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 SSX4O60224 188 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 AP2A2O94973 939 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CSTF2P33240 577 aaKnown RBP eCLIP8.39□□□□□ -1.07
TDP1-204ENST00000545686 CRATP43155 626 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 MAPK9P45984 424 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 RORCP51449 518 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CRISP1P54107 249 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SMAD3P84022 425 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 ZXDBP98169 803 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ARMC4Q5T2S8 1044 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ERAP2Q6P179 960 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 TMPRSS11AQ6ZMR5 421 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 Q6ZNB5 142 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PTCHD4Q6ZW05 846 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 NRARPQ7Z6K4 114 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 APCDD1Q8J025 514 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 OR8H2Q8N162 312 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 OR52J3Q8NH60 311 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ASZ1Q8WWH4 475 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ASB15Q8WXK1 588 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ST6GAL2Q96JF0 529 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SLC35A5Q9BS91 424 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 ATG10Q9H0Y0 220 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 REEP4Q9H6H4 257 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 BRD9Q9H8M2 597 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SGK2Q9HBY8 427 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 HHATLQ9HCP6 504 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ABCB8Q9NUT2 735 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 GPATCH2Q9NW75 528 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 C14orf119Q9NWQ9 140 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ERVK13-1Q9NX77 482 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 KCND3Q9UK17 655 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ANGPT4Q9Y264 503 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PCDHB7Q9Y5E2 793 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PRAMEF25A6NGN4 478 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 FADS2P1A8MWK0 482 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ADAM12O43184 909 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PSIP1O75475 530 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 ZNF821O75541 412 aaPredicted RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 SLCO2B1O94956 709 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 GADD45GO95257 159 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CELF2O95319 508 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 LGI1O95970 557 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ADAP00813 363 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 OPN1SWP03999 348 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 GALTP07902 379 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ETFAP13804 333 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 TNFRSF1BP20333 461 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CXCR2P25025 360 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ITGB7P26010 798 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 GKP32189 559 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 RFX2P48378 723 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PCBP3P57721 371 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 SNRPD1P62314 119 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 PSPHP78330 225 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 MRPS15P82914 257 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 PTSQ03393 145 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 RUNX1T1Q06455 604 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ZNF763Q0D2J5 394 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ASAH1Q13510 395 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 DDX39BQ13838 428 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 PDE7AQ13946 482 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ZNF770Q6IQ21 691 aaPredicted RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 KLHL17Q6TDP4 642 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 AQP11Q8NBQ7 271 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 NFKBIDQ8NI38 313 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 REPS1Q96D71 796 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 KCNS3Q9BQ31 491 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 FAM83CQ9BQN1 747 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 MND1Q9BWT6 205 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 BBS2Q9BXC9 721 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SRRQ9GZT4 340 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 TMEM245Q9H330 911 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SLA2Q9H6Q3 261 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 ITM2CQ9NQX7 267 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 DDX28Q9NUL7 540 aaKnown RBP8.39□□□□□ -1.07
TDP1-204ENST00000545686 NDUFB11Q9NX14 153 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 TAS2R16Q9NYV7 291 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 STUB1Q9UNE7 303 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 SNX8Q9Y5X2 465 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 A0A1W2PQ67 120 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 HYKKA2RU49 373 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 QSOX1O00391 747 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SEC14L5O43304 696 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 HOXA2O43364 376 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GREM1O60565 184 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SEMA3DO95025 777 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 MFN2O95140 757 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ETHE1O95571 254 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 C1SP09871 688 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ARAFP10398 606 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms