RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 A8MUA0 341 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 TNFRSF21O75509 655 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SP1P08047 785 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SMIM10L1P0DMW3 83 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 EEF1DP29692 281 aaKnown RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 HNF4AP41235 474 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 ELK3P41970 407 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 AP1S2P56377 157 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 TAS2R50P59544 299 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RAB8AP61006 207 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 REEP5Q00765 189 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RGS1Q08116 209 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 HYAL2Q12891 473 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 CDSNQ15517 529 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 MAPKAPK3Q16644 382 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 KRTCAP3Q53RY4 240 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 FAM45BPQ6NSW5 357 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 MTFR2Q6P444 385 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 XKRXQ6PP77 449 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SBSNQ6UWP8 590 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RPTNQ6XPR3 784 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 Q6ZPB1 254 aaPredicted RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 NCCRP1Q6ZVX7 275 aaPredicted RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 STRA8Q7Z7C7 330 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 THOC6Q86W42 341 aaKnown RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 ZNF227Q86WZ6 799 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SIAH3Q8IW03 269 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 LGI4Q8N135 537 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 ANKRD53Q8N9V6 530 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 TMEM178AQ8NBL3 297 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 NFAM1Q8NET5 270 aaPredicted RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 GABPB2Q8TAK5 448 aaPredicted RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 FAM45AQ8TCE6 357 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 ATL1Q8WXF7 558 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 CFAP36Q96G28 342 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 PDLIM5Q96HC4 596 aaKnown RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 SMIM10Q96HG1 83 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 TSNARE1Q96NA8 513 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 PTCHD1Q96NR3 888 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 NAT9Q9BTE0 207 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 AICDAQ9GZX7 198 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RHBGQ9H310 441 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 RUBCNLQ9H714 662 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 PPANQ9NQ55 473 aaKnown RBP7.93□□□□□ -1.14
USP28-215ENST00000545608 NECTIN3Q9NQS3 549 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 LRFN1Q9P244 771 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SNX12Q9UMY4 172 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 CHMP2BQ9UQN3 213 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SLC22A14Q9Y267 594 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 CPAMD8Q8IZJ3 1885 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 SCN2AQ99250 2005 aa7.93□□□□□ -1.14
USP28-215ENST00000545608 IGKV3D-11A0A0A0MRZ8 115 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 PABPN1LA6NDY0 278 aaKnown RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 C4orf51C9J302 202 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 C19orf84I3L1E1 186 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CDC7O00311 574 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CES2O00748 559 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 ASNA1O43681 348 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 ENO2P09104 434 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 ESRRAP11474 423 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 POU3F2P20265 443 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 MAOAP21397 527 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 JAK1P23458 1154 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 TPP2P29144 1249 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 AHRP35869 848 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CASP6P55212 293 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 MLF1P58340 268 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 HSF1Q00613 529 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 RBBP5Q15291 538 aaKnown RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 PPP1R3AQ16821 1122 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 C18orf21Q32NC0 220 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 STEAP4Q687X5 459 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 NXPE4Q6UWF7 544 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 QSOX2Q6ZRP7 698 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 ABHD13Q7L211 337 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 TMPRSS11BQ86T26 416 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CHERPQ8IWX8 916 aaKnown RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 TBC1D19Q8N5T2 526 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 HORMAD2Q8N7B1 307 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CREB3L4Q8TEY5 395 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 SLCO2A1Q92959 643 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 MAGED4Q96JG8 741 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 TRIM45Q9H8W5 580 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 PELI2Q9HAT8 420 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CLK4Q9HAZ1 481 aaKnown RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 CHST11Q9NPF2 352 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 TRMT1Q9NXH9 659 aaKnown RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 ZFATQ9P243 1243 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CORO1CQ9ULV4 474 aaPredicted RBP7.92□□□□□ -1.14
USP28-215ENST00000545608 MEMO1Q9Y316 297 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 DYRK1BQ9Y463 629 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 PSAT1Q9Y617 370 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 TEX264Q9Y6I9 313 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 CENPEQ02224 2701 aa7.92□□□□□ -1.14
USP28-215ENST00000545608 A0A0G2JN53 185 aa7.91□□□□□ -1.14
USP28-215ENST00000545608 TCRBV16S1A1N1A0A5B0 115 aa7.91□□□□□ -1.14
USP28-215ENST00000545608 NPEPPSL1A6NEC2 478 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms