RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TRIM64BA6NI03 449 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 GFYI3L273 518 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 NDUFS4O43181 175 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 MYO1DO94832 1006 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 MBD3O95983 291 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 ESR1P03372 595 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 HRGP04196 525 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 SLC35G6P0C7Q6 338 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 ALOX12P18054 663 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 PPP2R1BP30154 601 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 SOX3P41225 446 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 SKIV2L2P42285 1042 aaKnown RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 MAN2A2P49641 1150 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CLCN7P51798 805 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 RWDD2BP57060 319 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TPM4P67936 248 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 MEF2AQ02078 507 aaPredicted RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 KLF1Q13351 362 aaPredicted RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 CUL1Q13616 776 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 WLSQ5T9L3 541 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 NDUFAF5Q5TEU4 345 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CYHR1Q6ZMK1 362 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CTAGE6Q86UF2 777 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 SLC13A5Q86YT5 568 aaPredicted RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 OTUD6BQ8N6M0 293 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 PRELID2Q8N945 189 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 ARMC2Q8NEN0 867 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TNIP2Q8NFZ5 429 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 KIAA1191Q96A73 305 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 PDLIM2Q96JY6 352 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CAPZA3Q96KX2 299 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 IL1RL2Q9HB29 575 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 CCDC177Q9NQR7 707 aaPredicted RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TUBA8Q9NY65 449 aaPredicted RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 TRPS1Q9UHF7 1281 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 PPIEQ9UNP9 301 aaKnown RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 MED16Q9Y2X0 877 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 YARS2Q9Y2Z4 477 aaKnown RBP8.7□□□□□ -1.02
CHD4-212ENST00000545083 CLDN16Q9Y5I7 305 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 HSPB2A8KAH6 182 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 C4orf51C9J302 202 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 H3BMM5 538 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 DVL2O14641 736 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ARHGEF9O43307 516 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 SUSD5O60279 629 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 CEP104O60308 925 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ZNF354AO60765 605 aaPredicted RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 VAPBO95292 243 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 C8BP07358 591 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ZNF888P0CJ79 500 aaPredicted RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 CDH1P12830 882 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ETS1P14921 441 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 CNR1P21554 472 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 CEACAM8P31997 349 aaPredicted RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 DNASE1L1P49184 302 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ADARP55265 1226 aaKnown RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 SESN2P58004 480 aaPredicted RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 PPP2R2BQ00005 443 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 TRIM14Q14142 442 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 HSPB2Q16082 182 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 HYAL4Q2M3T9 481 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 MBOAT1Q6ZNC8 495 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 PIWIL4Q7Z3Z4 852 aaKnown RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 C17orf64Q86WR6 236 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 PHC2Q8IXK0 858 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 GPALPP1Q8IXQ4 340 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ULK2Q8IYT8 1036 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 SIMC1Q8NDZ2 872 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ATG4AQ8WYN0 398 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 SARAFQ96BY9 339 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 VMP1Q96GC9 406 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 SCYL1Q96KG9 808 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 Q96MF0 132 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 RASL10BQ96S79 203 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 FAM173AQ9BQD7 235 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 AARSD1Q9BTE6 412 aaKnown RBP8.69□□□□□ -1.02
CHD4-212ENST00000545083 RHBGQ9H310 441 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 LDAHQ9H6V9 325 aa8.69□□□□□ -1.02
CHD4-212ENST00000545083 EML6Q6ZMW3 1958 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 TRGV5A0A0B4J1U4 118 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 GOLGA6L9A6NEM1 432 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 FAM47E-STBD1D6RA91 191 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 E5RI56 91 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 E7EVH7 732 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 WWP2O00308 870 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 ZBTB14O43829 449 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 ZFAND5O76080 213 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 SERPIND1P05546 499 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 RFPL3SP0C7P2 107 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 MPC1LP0DKB6 136 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 CCL3P10147 92 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms