RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 IMMP1LQ96LU5 166 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 PTCHD1Q96NR3 888 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 LMF1Q96S06 567 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 AICDAQ9GZX7 198 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 ILKAPQ9H0C8 392 aaPredicted RBP14.81□□□□□ -0.04
CCDC78-216ENST00000544996 MRPL46Q9H2W6 279 aaKnown RBP14.81□□□□□ -0.04
CCDC78-216ENST00000544996 IPPKQ9H8X2 491 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 PSMC3IPQ9P2W1 217 aaPredicted RBP14.81□□□□□ -0.04
CCDC78-216ENST00000544996 MED13Q9UHV7 2174 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 IGHV3-20A0A0C4DH32 117 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 A0A0G2JN53 185 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 STX16-NPEPL1H3BU86 382 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 STX16O14662 325 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 UGDHO60701 494 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 SEC24DO94855 1032 aaPredicted RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 SORBS2O94875 1100 aaKnown RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 GCAP28676 217 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 TNFRSF8P28908 595 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 EEF1DP29692 281 aaKnown RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 MTTPP55157 894 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PHEXP78562 749 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 FOXK1P85037 733 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 MFAP5Q13361 173 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 EXT1Q16394 746 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 BTBD16Q32M84 506 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 TMEM35AQ53FP2 167 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 SFT2D3Q587I9 215 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PLAG1Q6DJT9 500 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ADNP2Q6IQ32 1131 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 IGFL2Q6UWQ7 119 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 QSOX2Q6ZRP7 698 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 LINC00696Q6ZRV3 163 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 GOLGA7Q7Z5G4 137 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 LCA5Q86VQ0 697 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ATCAYQ86WG3 371 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 CA13Q8N1Q1 262 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 OR7G3Q8NG95 312 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 BRIX1Q8TDN6 353 aaKnown RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ADAMTS18Q8TE60 1221 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ZNF473Q8WTR7 871 aaKnown RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 UBLCP1Q8WVY7 318 aaPredicted RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ATP6V1E2Q96A05 226 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 REPS1Q96D71 796 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PHF21BQ96EK2 531 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 KCNC2Q96PR1 638 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 F2RL3Q96RI0 385 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 SERINC2Q96SA4 455 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 LPAR4Q99677 370 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 WDR77Q9BQA1 342 aaPredicted RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 CENPKQ9BS16 269 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ROGDIQ9GZN7 287 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 ZBTB20Q9HC78 741 aaPredicted RBP14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PRDM9Q9NQV7 894 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 LUZP4Q9P127 313 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PTGFRNQ9P2B2 879 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 TEKT2Q9UIF3 430 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 PCDHGA11Q9Y5H2 935 aa14.8□□□□□ -0.04
CCDC78-216ENST00000544996 LRRC14BA6NHZ5 514 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 C4orf51C9J302 202 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 E2F3O00716 465 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 CLDN4O14493 209 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 SIX3O95343 332 aaPredicted RBP14.79□□□□□ -0.04
CCDC78-216ENST00000544996 TBX6O95947 436 aaPredicted RBP14.79□□□□□ -0.04
CCDC78-216ENST00000544996 MYBL2P10244 700 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
CCDC78-216ENST00000544996 PIK3CBP42338 1070 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 CD97P48960 835 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 OR4D2P58180 307 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 IGFBP7Q16270 282 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 PLEKHN1Q494U1 663 aaPredicted RBP14.79□□□□□ -0.04
CCDC78-216ENST00000544996 Q6ZS92 163 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 IQCKQ8N0W5 287 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 DNAJB14Q8TBM8 379 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 CPT1CQ8TCG5 803 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 ACMSDQ8TDX5 336 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 PPP4R1Q8TF05 950 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 PSMF1Q92530 271 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 TSLPQ969D9 159 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 CMTM7Q96FZ5 175 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 TBCDQ9BTW9 1192 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 MS4A8Q9BY19 250 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 PPCSQ9HAB8 311 aa14.79□□□□□ -0.04
CCDC78-216ENST00000544996 MRPS33Q9Y291 106 aaKnown RBP14.79□□□□□ -0.04
CCDC78-216ENST00000544996 DYTNA2CJ06 578 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 FAM227AF5H4B4 570 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 H0YIV9 168 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
CCDC78-216ENST00000544996 CLDN9O95484 217 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 TGFB1P01137 390 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 CELA2AP08217 269 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 ITGAMP11215 1152 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 TAC1P20366 129 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 CCNG1P51959 295 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 RAB38P57729 211 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 BTG2P78543 158 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 DDX39BQ13838 428 aaKnown RBP14.78□□□□□ -0.04
CCDC78-216ENST00000544996 RUNX2Q13950 521 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 AP5B1Q2VPB7 878 aa14.78□□□□□ -0.04
CCDC78-216ENST00000544996 ABHD17BQ5VST6 288 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms