RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZNF888P0CJ79 500 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC35E2BP0CK96 405 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PCNAP12004 261 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PTX3P26022 381 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 BUD31P41223 144 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SSR2P43308 183 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC6A12P48065 614 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CCT5P48643 541 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 HSPA7P48741 367 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CD97P48960 835 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CCNG1P51959 295 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MTTPP55157 894 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 BTN3A2P78410 334 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MRPS25P82663 173 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SRSF11Q05519 484 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PCDH1Q08174 1060 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 TBL3Q12788 808 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ASPHQ12797 758 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 IFT88Q13099 833 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC13A2Q13183 592 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CHIT1Q13231 466 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 RAPSNQ13702 412 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ZNF460Q14592 562 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 INPP5JQ15735 1006 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PFKFB4Q16877 469 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 TOR1AIP1Q5JTV8 583 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC6A19Q695T7 634 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 RPUSD3Q6P087 351 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MTFR2Q6P444 385 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ZDHHC24Q6UX98 284 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLCO4C1Q6ZQN7 724 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 COX15Q7KZN9 410 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 VN1R4Q7Z5H5 301 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PLD3Q8IV08 490 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC22A9Q8IVM8 553 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CYP4X1Q8N118 509 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 LGI4Q8N135 537 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 C17orf53Q8N3J3 647 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 TMEM132CQ8N3T6 1108 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 AFAP1L2Q8N4X5 818 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 BCORP1Q8N888 145 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 TMEM178AQ8NBL3 297 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 KCT2Q8NC54 265 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 OR2L5Q8NG80 312 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 OR5L2Q8NGL0 311 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ACMSDQ8TDX5 336 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 UBTD2Q8WUN7 234 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ANKRD49Q8WVL7 239 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC44A1Q8WWI5 657 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 HAS2Q92819 552 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 RGMAQ96B86 450 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MRRFQ96E11 262 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CCDC126Q96EE4 140 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 DTNBP1Q96EV8 351 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 RBM18Q96H35 190 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PEX11GQ96HA9 241 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ART5Q96L15 291 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 C5orf34Q96MH7 638 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SERINC2Q96SA4 455 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PAFAH2Q99487 392 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MRPL57Q9BQC6 102 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PELOQ9BRX2 385 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 WDR83Q9BRX9 315 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MCMBPQ9BTE3 642 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 FUT8Q9BYC5 575 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC6A16Q9GZN6 736 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 IQCGQ9H095 443 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MRPL46Q9H2W6 279 aaKnown RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ZNF552Q9H707 407 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CAB39LQ9H9S4 337 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 KCNK13Q9HB14 408 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 LYRM4Q9HD34 91 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MMP25Q9NPA2 562 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC22A11Q9NSA0 550 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 ZDHHC18Q9NUE0 388 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PSD3Q9NYI0 1048 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 HCN3Q9P1Z3 774 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PSMC3IPQ9P2W1 217 aaPredicted RBP5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 COPG2Q9UBF2 871 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 COPS7AQ9UBW8 275 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 FETUBQ9UGM5 382 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PHF11Q9UIL8 331 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PCDHGB6Q9Y5F9 930 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 CLCA3PQ9Y6N3 262 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 MTORP42345 2549 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 PDZD2O15018 2839 aa5.29□□□□□ -1.56
CLSTN3-215ENST00000544584 HIVEP1P15822 2718 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 KRT87PA6NCN2 255 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 LRIT2A6NDA9 550 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 A8MUI8 341 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 POC1B-GALNT4F8VUJ3 575 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 STX16-NPEPL1H3BU86 382 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 FOXE1O00358 373 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 STX16O14662 325 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 P2RX6O15547 441 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CHST10O43529 356 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms