RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 MARK2Q7KZI7 788 aaKnown RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 RABEPKQ7Z6M1 372 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ISCA2Q86U28 154 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 KLHDC8AQ8IYD2 350 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF619Q8N2I2 560 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 METTL27Q8N6F8 245 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 Q8N9P0 234 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 CKAP2Q8WWK9 683 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 CDHR1Q96JP9 859 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 WACQ9BTA9 647 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 PI4K2AQ9BTU6 479 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 IDI2Q9BXS1 227 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 SDCBP2Q9H190 292 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 RAVER2Q9HCJ3 691 aaKnown RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 PNPLA3Q9NST1 481 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 TMOD3Q9NYL9 352 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 TEX264Q9Y6I9 313 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 LAMB2P55268 1798 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ANKDD1BA6NHY2 528 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ATP6V0E1O15342 81 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 NGFP01138 241 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 MMP10P09238 476 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 AMD1P17707 334 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 CEACAM8P31997 349 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 SFTPDP35247 375 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 LBX1P52954 281 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 FOXG1P55316 489 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ARL16Q0P5N6 197 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ABRQ12979 859 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 FHL1Q13642 323 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 RBM39Q14498 530 aaKnown RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 PPA1Q15181 289 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 EXT1Q16394 746 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 FUT11Q495W5 492 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ZC2HC1CQ53FD0 456 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 KLHL10Q6JEL2 608 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 UGT3A1Q6NUS8 523 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF530Q6P9A1 599 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 LRRC8CQ8TDW0 803 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 RASL10BQ96S79 203 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 MEIS3Q99687 375 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 C17orf62Q9BQA9 187 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ALKBH7Q9BT30 221 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-207ENST00000544052 RNF121Q9H920 327 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 CHST11Q9NPF2 352 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ARID2Q68CP9 1835 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 A0A0B4J203 849 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 SYCE3A1L190 88 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ERVV-2B6SEH9 535 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 BUB3O43684 328 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ZBTB14O43829 449 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 RAD51DO75771 328 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 CRYAAP02489 173 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 CDKN1AP38936 164 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ARF5P84085 180 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 GFPT1Q06210 699 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ARHGAP1Q07960 439 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 SLC39A6Q13433 755 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 OPCMLQ14982 345 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 MTHFSDQ2M296 383 aaKnown RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF542PQ5EBM4 170 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 C20orf194Q5TEA3 1177 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 PRSS42Q7Z5A4 293 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 CPEB2Q7Z5Q1 589 aaKnown RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 GPR141Q7Z602 305 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 C5orf24Q7Z6I8 188 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ZDHHC17Q8IUH5 632 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 SMYD1Q8NB12 490 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 KLHDC9Q8NEP7 349 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 OR4C3Q8NH37 302 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 METTL21AQ8WXB1 218 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 C4orf45Q96LM5 186 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 PRMT1Q99873 361 aaKnown RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 PANK2Q9BZ23 570 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 INTS9Q9NV88 658 aaKnown RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 ANKRD36CQ5JPF3 1778 aa3.34□□□□□ -1.87
SCFD1-207ENST00000544052 USP42Q9H9J4 1324 aaKnown RBP3.34□□□□□ -1.87
SCFD1-207ENST00000544052 A0A0G2JLW4 131 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 TRBV5-5A0A0J9YX44 114 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 MAGEB16A2A368 324 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 DENND3A2RUS2 1198 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 ANTXRLA6NF34 631 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 SNURFLB1AK76 121 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 GP1BBP13224 206 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 CD59P13987 128 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 DPEP1P16444 411 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 DNA2P51530 1060 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 IL1RL1Q01638 556 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 GPR17Q13304 367 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 TAF13Q15543 124 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 RBMS3Q6XE24 437 aaKnown RBP3.34□□□□□ -1.88
SCFD1-207ENST00000544052 PIGZQ86VD9 579 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 RTL3Q8N8U3 475 aaKnown RBP3.34□□□□□ -1.88
SCFD1-207ENST00000544052 OR7A2PQ8NGA2 310 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 OR13C3Q8NGS6 347 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 PIK3R3Q92569 461 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 RFT1Q96AA3 541 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 MARK4Q96L34 752 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms