RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CRISP1P54107 249 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 RPS13P62277 151 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 SLC36A4Q6YBV0 504 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 TMC8Q8IU68 726 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 TMEM130Q8N3G9 435 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 SAMD12Q8N8I0 201 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 OR8J1Q8NGP2 316 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 AUTS2Q8WXX7 1259 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 PTERQ96BW5 349 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 DEC1Q9P2X7 70 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 UBQLN2Q9UHD9 624 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 PPIEQ9UNP9 301 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 MCIDASD6RGH6 385 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF432O94892 652 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 CA5AP35218 305 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 FUBP1Q96AE4 644 aaKnown RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 NLKQ9UBE8 527 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 IFT52Q9Y366 437 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 C2orf92A0A1B0GVN3 265 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 KANTRA0A1W2PQU2 76 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 KCNA5P22460 613 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 DNASE1P24855 282 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 GJA5P36382 358 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 CLDN8P56748 225 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 GTDC1Q4AE62 458 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 GET4Q7L5D6 327 aaPredicted RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 CHDHQ8NE62 594 aaPredicted RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 OR6Q1Q8NGQ2 317 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 NETO1Q8TDF5 533 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ZSWIM3Q96MP5 696 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 PIP5K1AQ99755 562 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ABCG5Q9H222 651 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ZBTB20Q9HC78 741 aaPredicted RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 A0A0D9SEW6 157 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 OR2AT4A6NND4 320 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 SMIM18P0DKX4 95 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ATP1B2P14415 290 aaPredicted RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ITPKBP27987 946 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ERVPABLB-1P60509 514 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 RCAN2Q14206 197 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 FAM46CQ5VWP2 391 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
SUDS3-204ENST00000543473 GPRIN1Q7Z2K8 1008 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 PARGQ86W56 976 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 COMMD4Q9H0A8 199 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 CD93Q9NPY3 652 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 FBXL21Q9UKT6 434 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 SERINC5Q86VE9 423 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 ACVR1CQ8NER5 493 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 C3orf30Q96M34 536 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 PCDHGB7Q9Y5F8 929 aa18.67■□□□□ 0.58
SUDS3-204ENST00000543473 J3QLW9 94 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 KDELR3O43731 214 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 SLC19A2O60779 497 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF19P17023 458 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 MAVSQ7Z434 540 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 STX12Q86Y82 276 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 TMEM151AQ8N4L1 468 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF563Q8TA94 476 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 NUFIP1Q9UHK0 495 aaKnown RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 MYO18AQ92614 2054 aaKnown RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 XKRYO14609 159 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF24P17028 368 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF763Q0D2J5 394 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ST3GAL3Q11203 375 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 DEDD2Q8WXF8 326 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 MAELQ96JY0 434 aaKnown RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 STUB1Q9UNE7 303 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 PCDHB11Q9Y5F2 797 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 GLI3P10071 1580 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ALDH3B2P48448 385 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 PSAPL1Q6NUJ1 521 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 TMEM174Q8WUU8 243 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 PCBD2Q9H0N5 130 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 NEUROD4Q9HD90 331 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 AQP9O43315 295 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 RBBP4Q09028 425 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 SCRN3Q0VDG4 424 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 EIPR1Q53HC9 387 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF782Q6ZMW2 699 aaPredicted RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF767PQ75MW2 155 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 RHOXF1Q8NHV9 184 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 RAB8BQ92930 207 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 HYLS1Q96M11 299 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 PPIL3Q9H2H8 161 aaKnown RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 OCEL1Q9H607 264 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 MRPS33Q9Y291 106 aaKnown RBP18.66■□□□□ 0.58
SUDS3-204ENST00000543473 DLGAP4Q9Y2H0 992 aa18.66■□□□□ 0.58
SUDS3-204ENST00000543473 DUXAA6NLW8 204 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 ITGA10O75578 1167 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 ACVR2AP27037 513 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 TAZQ16635 292 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms