RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 B3GALT4O96024 378 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 HEXBP07686 556 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 CPA3P15088 417 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 JAK1P23458 1154 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 EMP2P54851 167 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 MTTPP55157 894 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 BTN3A2P78410 334 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 LCP2Q13094 533 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 TUBB8Q3ZCM7 444 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 CEP85LQ5SZL2 805 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 DEPDC1Q5TB30 811 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 FRG2Q64ET8 278 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 LETMD1Q6P1Q0 360 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 TMEM205Q6UW68 189 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 RPS27LQ71UM5 84 aaKnown RBP17.36■□□□□ 0.37
COPS7A-216ENST00000543170 LAPTM4BQ86VI4 370 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 PRSS58Q8IYP2 241 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 CCDC63Q8NA47 563 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 OR5T3Q8NGG3 340 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 TRPC4APQ8TEL6 797 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 TBC1D20Q96BZ9 403 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 PEX11GQ96HA9 241 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 FRG2BQ96QU4 278 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 F2RL3Q96RI0 385 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 CENPKQ9BS16 269 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 TBCDQ9BTW9 1192 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 VN1R1Q9GZP7 353 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 ING2Q9H160 280 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 GSTO2Q9H4Y5 243 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 COPS7BQ9H9Q2 264 aaPredicted RBP17.36■□□□□ 0.37
COPS7A-216ENST00000543170 SSU72Q9NP77 194 aaKnown RBP17.36■□□□□ 0.37
COPS7A-216ENST00000543170 OXSMQ9NWU1 459 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 MKL2Q9ULH7 1088 aa17.36■□□□□ 0.37
COPS7A-216ENST00000543170 LOC102723996A0A087X1L8 192 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 B3GALT2O43825 422 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 TGFB1P01137 390 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 FHP07954 510 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 RNH1P13489 461 aaKnown RBP17.35■□□□□ 0.37
COPS7A-216ENST00000543170 ACPPP15309 386 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 PLA2G16P53816 162 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 PKNOX1P55347 436 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 KCNAB2Q13303 367 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 CUL3Q13618 768 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 DDX39BQ13838 428 aaKnown RBP17.35■□□□□ 0.37
COPS7A-216ENST00000543170 DCAF10Q5QP82 559 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 LIPMQ5VYY2 423 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 CPZQ66K79 652 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 KIRREL2Q6UWL6 708 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 CA13Q8N1Q1 262 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 OR11G2Q8NGC1 345 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 PGM2Q96G03 612 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 MTERF1Q99551 399 aaKnown RBP17.35■□□□□ 0.37
COPS7A-216ENST00000543170 SLC29A3Q9BZD2 475 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 PRDM7Q9NQW5 492 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 ACSS2Q9NR19 701 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 LANCL2Q9NS86 450 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 ZNF225Q9UK10 706 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 ACTL7BQ9Y614 415 aa17.35■□□□□ 0.37
COPS7A-216ENST00000543170 A0A1B0GTL3 188 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 MAGEB17A8MXT2 336 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 PPP6CO00743 305 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 TYROBPO43914 113 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 ALOX12BO75342 701 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 JRKO75564 520 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 CEACAM4O75871 244 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 SEMA3DO95025 777 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 ENO1P06733 434 aaKnown RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 FAM87AP0C7U9 286 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 PTX3P26022 381 aaPredicted RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 EFNA3P52797 238 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 RPS13P62277 151 aaKnown RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 OLR1P78380 273 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 IFT88Q13099 833 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 PCLAFQ15004 111 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 MINDY4Q4G0A6 757 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 TTC19Q6DKK2 380 aaPredicted RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 QSOX2Q6ZRP7 698 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 FRMD7Q6ZUT3 714 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 GPRIN3Q6ZVF9 776 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 UBE3DQ7Z6J8 389 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 EXD3Q8N9H8 876 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 CLEC1AQ8NC01 280 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 PLPP5Q8NEB5 264 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 ARMC2Q8NEN0 867 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 TCP10LQ8TDR4 215 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 BBC3Q96PG8 261 aaPredicted RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 FAM111AQ96PZ2 611 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 TRIM55Q9BYV6 548 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 C12orf65Q9H3J6 166 aaKnown RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 ELOVL6Q9H5J4 265 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 LYRM4Q9HD34 91 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 C19orf25Q9UFG5 118 aaPredicted RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 FBXL4Q9UKA2 621 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 SNX6Q9UNH7 406 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 PCDHGA9Q9Y5G4 932 aaKnown RBP17.34■□□□□ 0.37
COPS7A-216ENST00000543170 BSNQ9UPA5 3926 aa17.34■□□□□ 0.37
COPS7A-216ENST00000543170 A0A0G2JN53 185 aa17.33■□□□□ 0.36
COPS7A-216ENST00000543170 MKRN2OSH3BPM6 223 aa17.33■□□□□ 0.36
COPS7A-216ENST00000543170 PSMD12O00232 456 aaPredicted RBP17.33■□□□□ 0.36
COPS7A-216ENST00000543170 DNAJB6O75190 326 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms