RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SDHDO14521 159 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 FOXS1O43638 330 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 B3GALT2O43825 422 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ATP5A1P25705 553 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 MAD2L1Q13257 205 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 RTP5Q14D33 572 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 C6orf136Q5SQH8 315 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ACAD11Q709F0 780 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ZFAND4Q86XD8 727 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ZCCHC7Q8N3Z6 543 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ACOT4Q8N9L9 421 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 OR9A4Q8NGU2 314 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 CEP70Q8NHQ1 597 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 MMABQ96EY8 250 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 MAELQ96JY0 434 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 DPH2Q9BQC3 489 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 WDR55Q9H6Y2 383 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 AKTIPQ9H8T0 292 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 DCTN4Q9UJW0 460 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 KLK13Q9UKR3 277 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 CACNA1AO00555 2505 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 C4orf51C9J302 202 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 RTCAO00442 366 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 DXOO77932 396 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 STK17BO94768 372 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 SCELO95171 688 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 MED26O95402 600 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 PIM1P11309 404 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 LBPP18428 481 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 AGXTP21549 392 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 CD82P27701 267 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 EPHA3P29320 983 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 GALNT18Q6P9A2 607 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 PARP9Q8IXQ6 854 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 SLC38A9Q8NBW4 561 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ACTRT2Q8TDY3 377 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 STON2Q8WXE9 905 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 NXPE2Q96DL1 559 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 THOC1Q96FV9 657 aaKnown RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 SCNM1Q9BWG6 230 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 NPLQ9BXD5 320 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ZNF717Q9BY31 904 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 EPN3Q9H201 632 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 ZNF304Q9HCX3 659 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 LHX9Q9NQ69 397 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 TMEM184BQ9Y519 407 aaPredicted RBP21.91■■□□□ 1.1
HOMER3-205ENST00000542541 AK5Q9Y6K8 562 aa21.91■■□□□ 1.1
HOMER3-205ENST00000542541 SPTBP11277 2137 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 GOLGA8QA0A0J9YX86 632 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 GOLGA8OA6NCC3 632 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 GOLGA8NF8WBI6 632 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 MEN1O00255 615 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 SHOX2O60902 331 aaPredicted RBP21.9■■□□□ 1.1
HOMER3-205ENST00000542541 KLK1P06870 262 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 ZNF28P17035 718 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 MAPK1P28482 360 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 IDH3AP50213 366 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 DCDP81605 110 aaKnown RBP21.9■■□□□ 1.1
HOMER3-205ENST00000542541 SLC9A5Q14940 896 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 KIAA0040Q15053 153 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 SLC9B1Q4ZJI4 515 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 RFTN2Q52LD8 501 aaPredicted RBP21.9■■□□□ 1.1
HOMER3-205ENST00000542541 CCNYL2Q5T2Q4 361 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 C1orf189Q5VU69 101 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 NXNQ6DKJ4 435 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 CYP20A1Q6UW02 462 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 LARP4Q71RC2 724 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOMER3-205ENST00000542541 PRSS41Q7RTY9 318 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 PDSS2Q86YH6 399 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 FNDC5Q8NAU1 212 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 C11orf24Q96F05 449 aaPredicted RBP21.9■■□□□ 1.1
HOMER3-205ENST00000542541 GBP5Q96PP8 586 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 KLHL14Q9P2G3 628 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 MCM8Q9UJA3 840 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 WASF3Q9UPY6 502 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 NEUROG3Q9Y4Z2 214 aa21.9■■□□□ 1.1
HOMER3-205ENST00000542541 A0A0G2JND7 137 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 SGK494L7N484 410 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 PRR35P0CG20 571 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 SLC5A2P31639 672 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 RORAP35398 523 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 RPL38P63173 70 aaKnown RBP21.89■■□□□ 1.09
HOMER3-205ENST00000542541 EMX2Q04743 252 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 RFWD2Q8NHY2 731 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 COL26A1Q96A83 441 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 SORBS1Q9BX66 1292 aaKnown RBP21.89■■□□□ 1.09
HOMER3-205ENST00000542541 FAM107BQ9H098 131 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 TCF7L2Q9NQB0 619 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 THSD1Q9NS62 852 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 FOXJ2Q9P0K8 574 aa21.89■■□□□ 1.09
HOMER3-205ENST00000542541 GNG14A0A1W2PPG7 69 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 TRABD2BA6NFA1 517 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 CDRT15L2A8MXV6 281 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 PCDH7O60245 1069 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 B3GALT4O96024 378 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 CCNYL3P0C7X3 344 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 ACPPP15309 386 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 CERS1P27544 350 aa21.88■■□□□ 1.09
HOMER3-205ENST00000542541 TIA1P31483 386 aaKnown RBP eCLIP21.88■■□□□ 1.09
HOMER3-205ENST00000542541 ERVK-8P63133 956 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms