RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 NXPE3Q969Y0 559 aa8.78□□□□□ -1
THBS3-211ENST00000541990 MAP6Q96JE9 813 aa8.78□□□□□ -1
THBS3-211ENST00000541990 ACPTQ9BZG2 426 aa8.78□□□□□ -1
THBS3-211ENST00000541990 MAGEH1Q9H213 219 aa8.78□□□□□ -1
THBS3-211ENST00000541990 AASDHPPTQ9NRN7 309 aa8.78□□□□□ -1
THBS3-211ENST00000541990 NPAP1Q9NZP6 1156 aa8.78□□□□□ -1
THBS3-211ENST00000541990 CD84Q9UIB8 345 aa8.78□□□□□ -1
THBS3-211ENST00000541990 MSRAQ9UJ68 235 aa8.78□□□□□ -1
THBS3-211ENST00000541990 NUMA1Q14980 2115 aa8.78□□□□□ -1
THBS3-211ENST00000541990 CLCA1A8K7I4 914 aa8.77□□□□□ -1
THBS3-211ENST00000541990 EVPLLA8MZ36 301 aa8.77□□□□□ -1
THBS3-211ENST00000541990 IFRD1O00458 451 aaPredicted RBP8.77□□□□□ -1
THBS3-211ENST00000541990 AKR7A2O43488 359 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ZNF821O75541 412 aaPredicted RBP8.77□□□□□ -1
THBS3-211ENST00000541990 ACPPP15309 386 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ETV6P41212 452 aa8.77□□□□□ -1
THBS3-211ENST00000541990 GNPDA1P46926 289 aa8.77□□□□□ -1
THBS3-211ENST00000541990 CLCN7P51798 805 aa8.77□□□□□ -1
THBS3-211ENST00000541990 PCBP2Q15366 365 aaKnown RBP eCLIP8.77□□□□□ -1
THBS3-211ENST00000541990 MED22Q15528 200 aa8.77□□□□□ -1
THBS3-211ENST00000541990 SF1Q15637 639 aaKnown RBP8.77□□□□□ -1
THBS3-211ENST00000541990 CPSF6Q16630 551 aaKnown RBP eCLIP8.77□□□□□ -1
THBS3-211ENST00000541990 ARMC4Q5T2S8 1044 aa8.77□□□□□ -1
THBS3-211ENST00000541990 LRIF1Q5T3J3 769 aa8.77□□□□□ -1
THBS3-211ENST00000541990 NOXA1Q86UR1 476 aa8.77□□□□□ -1
THBS3-211ENST00000541990 PTOV1Q86YD1 416 aa8.77□□□□□ -1
THBS3-211ENST00000541990 RAB43Q86YS6 212 aa8.77□□□□□ -1
THBS3-211ENST00000541990 IQCF2Q8IXL9 164 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ZZZ3Q8IYH5 903 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ELMOD2Q8IZ81 293 aa8.77□□□□□ -1
THBS3-211ENST00000541990 HJURPQ8NCD3 748 aaPredicted RBP8.77□□□□□ -1
THBS3-211ENST00000541990 OR4M1Q8NGD0 313 aa8.77□□□□□ -1
THBS3-211ENST00000541990 SLC7A6Q92536 515 aa8.77□□□□□ -1
THBS3-211ENST00000541990 MAL2Q969L2 176 aa8.77□□□□□ -1
THBS3-211ENST00000541990 TIFAQ96CG3 184 aa8.77□□□□□ -1
THBS3-211ENST00000541990 HRASLS5Q96KN8 279 aa8.77□□□□□ -1
THBS3-211ENST00000541990 NIPSNAP1Q9BPW8 284 aa8.77□□□□□ -1
THBS3-211ENST00000541990 BOCQ9BWV1 1114 aa8.77□□□□□ -1
THBS3-211ENST00000541990 EBPLQ9BY08 206 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ZDHHC6Q9H6R6 413 aa8.77□□□□□ -1
THBS3-211ENST00000541990 SMURF1Q9HCE7 757 aa8.77□□□□□ -1
THBS3-211ENST00000541990 ACOXLQ9NUZ1 547 aa8.77□□□□□ -1
THBS3-211ENST00000541990 CLDND1Q9NY35 253 aa8.77□□□□□ -1
THBS3-211ENST00000541990 NUDT4Q9NZJ9 180 aa8.77□□□□□ -1
THBS3-211ENST00000541990 MKLN1Q9UL63 735 aa8.77□□□□□ -1
THBS3-211ENST00000541990 SAMD4AQ9UPU9 718 aaKnown RBP8.77□□□□□ -1
THBS3-211ENST00000541990 CFAP20Q9Y6A4 193 aaKnown RBP8.77□□□□□ -1
THBS3-211ENST00000541990 C12orf71A8MTZ7 269 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 WWP2O00308 870 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 RGS14O43566 566 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 CCNDBP1O95273 360 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 OTCP00480 354 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 OPN1SWP03999 348 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 RRM2P31350 389 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SSTR4P31391 388 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SOX3P41225 446 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 YBEYP58557 167 aaPredicted RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 GRIN2CQ14957 1233 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 DPY19L3Q6ZPD9 716 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 ATCAYQ86WG3 371 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SLC44A2Q8IWA5 706 aaPredicted RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 UTP15Q8TED0 518 aaKnown RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 FGF14Q92915 247 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 IRF7Q92985 503 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 MED30Q96HR3 178 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 FEVQ99581 238 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SH3GL1Q99961 368 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 CCM2Q9BSQ5 444 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 CNPPD1Q9BV87 410 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 KCNH6Q9H252 994 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 REEP1Q9H902 201 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 EXOSC4Q9NPD3 245 aaKnown RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 SPHK2Q9NRA0 654 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 TMEM45AQ9NWC5 275 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SPASTQ9UBP0 616 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 LHX3Q9UBR4 397 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 FAM8A1Q9UBU6 413 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 A3GALT2U3KPV4 340 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 PRRT4C9JH25 899 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 WNT9AO14904 365 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SCO1O75880 301 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SLITRK5O94991 958 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 SNX4O95219 450 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 KCNK5O95279 499 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 IL7P13232 177 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 POU2F1P14859 743 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 IFNA8P32881 189 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 S100A3P33764 101 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 RPS19P39019 145 aaKnown RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 KRT6CP48668 564 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 RPS14P62263 151 aaKnown RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 ABHD18Q0P651 414 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 HYAL2Q12891 473 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 EFR3AQ14156 821 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 GPAT3Q53EU6 434 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 ARHGAP15Q53QZ3 475 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 C10orf62Q5T681 223 aaPredicted RBP8.77□□□□□ -1.01
THBS3-211ENST00000541990 CACHD1Q5VU97 1274 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 PARM1Q6UWI2 310 aa8.77□□□□□ -1.01
THBS3-211ENST00000541990 CLECL1Q8IZS7 167 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms