RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 BBS7Q8IWZ6 715 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 CPNE9Q8IYJ1 553 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 UBQLNLQ8IYU4 475 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 STX19Q8N4C7 294 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 RHBDF1Q96CC6 855 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 LINGO1Q96FE5 620 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 SIGLEC11Q96RL6 698 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 GPR21Q99679 349 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 SEMA3CQ99985 751 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 MAPKAP1Q9BPZ7 522 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 C6orf62Q9GZU0 229 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 SLC22A4Q9H015 551 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 SOX17Q9H6I2 414 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 IPPKQ9H8X2 491 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 DDX28Q9NUL7 540 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 FAM120CQ9NX05 1096 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 MARCH4Q9P2E8 410 aaPredicted RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 TBC1D14Q9P2M4 693 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 GALPQ9UBC7 116 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 PSORS1C1Q9UIG5 152 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 KLK13Q9UKR3 277 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 AGO1Q9UL18 857 aaKnown RBP10.01□□□□□ -0.81
CHFR-219ENST00000541341 PKP3Q9Y446 797 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 OARD1Q9Y530 152 aa10.01□□□□□ -0.81
CHFR-219ENST00000541341 TRBV5-3A0A0A0MS03 114 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ANKRD34BA5PLL1 514 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TBC1D3BA6NDS4 549 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ARRDC5A6NEK1 342 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TMX2-CTNND1H3BSU7 103 aa10□□□□□ -0.81
CHFR-219ENST00000541341 SLC9A3R1O14745 358 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 CAPN5O15484 640 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 TBX1O43435 398 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TMCC2O75069 709 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ABCB1P08183 1280 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 MMP2P08253 660 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PIPP12273 146 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 CTPS1P17812 591 aa10□□□□□ -0.81
CHFR-219ENST00000541341 AGXTP21549 392 aa10□□□□□ -0.81
CHFR-219ENST00000541341 GGT2P36268 569 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PIGAP37287 484 aa10□□□□□ -0.81
CHFR-219ENST00000541341 RPL3P39023 403 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 PIK3CBP42338 1070 aa10□□□□□ -0.81
CHFR-219ENST00000541341 KIR2DL1P43626 348 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 MAPK9P45984 424 aa10□□□□□ -0.81
CHFR-219ENST00000541341 SLC11A2P49281 568 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MAPK10P53779 464 aa10□□□□□ -0.81
CHFR-219ENST00000541341 C21orf58P58505 322 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CDC42P60953 191 aa10□□□□□ -0.81
CHFR-219ENST00000541341 RPS14P62263 151 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 MRPS21P82921 87 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 DSC2Q02487 901 aa10□□□□□ -0.81
CHFR-219ENST00000541341 RPL6Q02878 288 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 SLC10A7Q0GE19 358 aa10□□□□□ -0.81
CHFR-219ENST00000541341 GALNT3Q14435 633 aa10□□□□□ -0.81
CHFR-219ENST00000541341 FAM174BQ3ZCQ3 159 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MS4A13Q5J8X5 152 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ADGRF1Q5T601 910 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ANXA8L1Q5VT79 327 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MEDAGQ5VYS4 303 aa10□□□□□ -0.81
CHFR-219ENST00000541341 RNLSQ5VYX0 342 aa10□□□□□ -0.81
CHFR-219ENST00000541341 LRRC66Q68CR7 880 aa10□□□□□ -0.81
CHFR-219ENST00000541341 NADSYN1Q6IA69 706 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ENPP6Q6UWR7 440 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ZNF783Q6ZMS7 281 aa10□□□□□ -0.81
CHFR-219ENST00000541341 GCNT7Q6ZNI0 430 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ZNF767PQ75MW2 155 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CBLL1Q75N03 491 aa10□□□□□ -0.81
CHFR-219ENST00000541341 GOLGA7Q7Z5G4 137 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PIM3Q86V86 326 aa10□□□□□ -0.81
CHFR-219ENST00000541341 NLRP8Q86W28 1048 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TMEM25Q86YD3 366 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PLCZ1Q86YW0 608 aa10□□□□□ -0.81
CHFR-219ENST00000541341 LIX1LQ8IVB5 337 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PLPP6Q8IY26 295 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ZNF683Q8IZ20 524 aa10□□□□□ -0.81
CHFR-219ENST00000541341 METTL4Q8N3J2 472 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PARP16Q8N5Y8 322 aa10□□□□□ -0.81
CHFR-219ENST00000541341 NETO2Q8NC67 525 aa10□□□□□ -0.81
CHFR-219ENST00000541341 AP3S1Q92572 193 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MARVELD3Q96A59 401 aa10□□□□□ -0.81
CHFR-219ENST00000541341 HMCESQ96FZ2 354 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CMTM7Q96FZ5 175 aa10□□□□□ -0.81
CHFR-219ENST00000541341 SPACA7Q96KW9 195 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CAMK1GQ96NX5 476 aa10□□□□□ -0.81
CHFR-219ENST00000541341 NSUN5Q96P11 429 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 WDFY2Q96P53 400 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TRNT1Q96Q11 434 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 PSKH2Q96QS6 385 aa10□□□□□ -0.81
CHFR-219ENST00000541341 KCNA7Q96RP8 456 aa10□□□□□ -0.81
CHFR-219ENST00000541341 ACOX2Q99424 681 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MGME1Q9BQP7 344 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CPPED1Q9BRF8 314 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 CDCA4Q9BXL8 241 aa10□□□□□ -0.81
CHFR-219ENST00000541341 TP63Q9H3D4 680 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 FKBP14Q9NWM8 211 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PDP1Q9P0J1 537 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 VAPAQ9P0L0 249 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MARK1Q9P0L2 795 aa10□□□□□ -0.81
CHFR-219ENST00000541341 HECAQ9UBI9 543 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms