RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TMPRSS11BQ86T26 416 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC34A3Q8N130 599 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF366Q8N895 744 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 L3MBTL4Q8NA19 623 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SYT14Q8NB59 555 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 KBTBD8Q8NFY9 601 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ASB15Q8WXK1 588 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 COL21A1Q96P44 957 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 OPALINQ96PE5 141 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC35A5Q9BS91 424 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SYT17Q9BSW7 474 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ASPNQ9BXN1 380 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SPNS1Q9H2V7 528 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 RANGRFQ9HD47 186 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ABCB8Q9NUT2 735 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZDHHC3Q9NYG2 299 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 NUFIP1Q9UHK0 495 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 MGAT4DA6NG13 374 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 NTN1O95631 604 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 EOMESO95936 686 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 JUPP14923 745 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PTNP21246 168 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CD83Q01151 205 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRKCDQ05655 676 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SCARB2Q14108 478 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 BRAT1Q6PJG6 821 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 Q6ZVL8 140 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 LRRC70Q7Z2Q7 622 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCDC190Q86UF4 302 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPR65Q8IYL9 337 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CMTM8Q8IZV2 173 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TP53I13Q8NBR0 393 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 C11orf65Q8NCR3 313 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 C7orf57Q8NEG2 295 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR4C15Q8NGM1 316 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 WDR20Q8TBZ3 569 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CSGALNACT1Q8TDX6 532 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHAC2Q8WUX2 184 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 EFHD2Q96C19 240 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ST6GAL2Q96JF0 529 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC30A2Q9BRI3 323 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TTLL2Q9BWV7 592 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SMURF1Q9HCE7 757 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 HHATLQ9HCP6 504 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ABCB9Q9NP78 766 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TAS2R9Q9NYW1 312 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 B4GALT6Q9UBX8 382 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CARD8Q9Y2G2 431 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 WBP11Q9Y2W2 641 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SAGE2PA6NJ88 616 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SMLR1H3BR10 107 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SEMA7AO75326 666 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 RECKO95980 971 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 MAPK1P28482 360 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRIM2P49643 509 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CTSCP53634 463 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SRSF11Q05519 484 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 STARD3Q14849 445 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SEC23BQ15437 767 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 MICAQ29983 383 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TNFAIP8L2Q6P589 184 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCDC80Q76M96 950 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SHFQ7M4L6 423 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZFP41Q8N8Y5 198 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 DTX3Q8N9I9 347 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SORCS1Q8WY21 1168 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 RAB8BQ92930 207 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ABCG4Q9H172 646 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CWH43Q9H720 699 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ACER3Q9NUN7 267 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 FKBP14Q9NWM8 211 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PCDHB7Q9Y5E2 793 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ANAPC1Q9H1A4 1944 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 FRMPD3Q5JV73 1810 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 REV3LO60673 3130 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 E9PQ18 207 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 FFAR1O14842 300 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 SNX4O95219 450 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 WEE1P30291 646 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ETV3P41162 512 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 AP1S1P61966 158 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF45Q02386 682 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPNMBQ14956 572 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 SMU1Q2TAY7 513 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ARMC4Q5T2S8 1044 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCSAPQ6IQ19 270 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 KIAA1841Q6NSI8 718 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 DPY19L3Q6ZPD9 716 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 Q6ZVU0 165 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR7G3Q8NG95 312 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR8J2Q8NGG1 315 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 LILRB4Q8NHJ6 448 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 UBASH3BQ8TF42 649 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 NEIL2Q969S2 332 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 PLD4Q96BZ4 506 aa9.92□□□□□ -0.82
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