RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
YBX3-210ENST00000540975 GIMAP2Q9UG22 337 aa4.71□□□□□ -1.66
YBX3-210ENST00000540975 IGLV3-10A0A075B6K4 115 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 ZNF749O43361 778 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 RPN1P04843 607 aaKnown RBP4.7□□□□□ -1.66
YBX3-210ENST00000540975 ADORA3P0DMS8 318 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 PPA1Q15181 289 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 EIPR1Q53HC9 387 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.7□□□□□ -1.66
YBX3-210ENST00000540975 ZNF770Q6IQ21 691 aaPredicted RBP4.7□□□□□ -1.66
YBX3-210ENST00000540975 CARM1Q86X55 608 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 MEX3DQ86XN8 651 aaKnown RBP4.7□□□□□ -1.66
YBX3-210ENST00000540975 EGFL6Q8IUX8 553 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 OTUD6BQ8N6M0 293 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 SETD6Q8TBK2 473 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 ZPLD1Q8TCW7 415 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 HNRNPABQ99729 332 aaKnown RBP4.7□□□□□ -1.66
YBX3-210ENST00000540975 UBAC1Q9BSL1 405 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 AP1M1Q9BXS5 423 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 TMOD3Q9NYL9 352 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 DBF4Q9UBU7 674 aaPredicted RBP4.7□□□□□ -1.66
YBX3-210ENST00000540975 PCDHGA1Q9Y5H4 931 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 HCFC1P51610 2035 aa4.7□□□□□ -1.66
YBX3-210ENST00000540975 A0A0B4J203 849 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 ZNF732B4DXR9 585 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 K7EQG2 157 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 HPP00738 406 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 ZFYP08048 801 aaPredicted RBP4.69□□□□□ -1.66
YBX3-210ENST00000540975 KRT3P12035 628 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 LMO2P25791 158 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 PRKCIP41743 596 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 TFCP2Q12800 502 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 SIX1Q15475 284 aaPredicted RBP4.69□□□□□ -1.66
YBX3-210ENST00000540975 KNOP1Q1ED39 458 aaKnown RBP4.69□□□□□ -1.66
YBX3-210ENST00000540975 C9orf66Q5T8R8 295 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 TRAT1Q6PIZ9 186 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 FGFRL1Q8N441 504 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 EXOC4Q96A65 974 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 DPEP2Q9H4A9 486 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 MINDY3Q9H8M7 445 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 MRGBPQ9NV56 204 aa4.69□□□□□ -1.66
YBX3-210ENST00000540975 IGKV6D-41A0A0C4DH26 115 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 ARHGEF37A1IGU5 675 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 ZNF840PA6NDX5 716 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 RPL37AP8A6NKH3 93 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 A8MU76 341 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 PHOX2AO14813 284 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 PHF1O43189 567 aaPredicted RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 PRDM1O75626 825 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 SIX3O95343 332 aaPredicted RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 MELTFP08582 738 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 OR3A1P47881 315 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 KHKP50053 298 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 RIDAP52758 137 aaKnown RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 ABRQ12979 859 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 GCKRQ14397 625 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 AGAP7PQ5VUJ5 663 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 SLC27A4Q6P1M0 643 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 REG3GQ6UW15 175 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 Q71RC1 249 aaPredicted RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 RPAINQ86UA6 219 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 KCNMB4Q86W47 210 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 DZIP1Q86YF9 867 aaKnown RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 ABCA7Q8IZY2 2146 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 SUMF1Q8NBK3 374 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 NABP1Q96AH0 204 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 SGF29Q96ES7 293 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 BSCL2Q96G97 398 aaPredicted RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 WDR41Q9HAD4 459 aa4.68□□□□□ -1.66
YBX3-210ENST00000540975 NOCTQ9UK39 431 aaKnown RBP4.68□□□□□ -1.66
YBX3-210ENST00000540975 A0A087WWV3 80 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 TRGV8A0A0C4DH27 118 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 TXNL1O43396 289 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 ACSL4O60488 711 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 FCGR2BP31994 310 aaPredicted RBP4.67□□□□□ -1.66
YBX3-210ENST00000540975 FCGR2CP31995 323 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 GP5P40197 560 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 CRYBA2P53672 197 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 CETN1Q12798 172 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 CNTN1Q12860 1018 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 MAPK11Q15759 364 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 GET4Q7L5D6 327 aaPredicted RBP4.67□□□□□ -1.66
YBX3-210ENST00000540975 CREBRFQ8IUR6 639 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
YBX3-210ENST00000540975 INTS14Q96SY0 518 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 PRMT1Q99873 361 aaKnown RBP4.67□□□□□ -1.66
YBX3-210ENST00000540975 LRRCC1Q9C099 1032 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 STRADBQ9C0K7 418 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 MOB1AQ9H8S9 216 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 KCNK13Q9HB14 408 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 PDRG1Q9NUG6 133 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 AUP1Q9Y679 476 aa4.67□□□□□ -1.66
YBX3-210ENST00000540975 SELENOFO60613 162 aa4.66□□□□□ -1.66
YBX3-210ENST00000540975 ANGPTL1O95841 491 aa4.66□□□□□ -1.66
YBX3-210ENST00000540975 CD1DP15813 335 aa4.66□□□□□ -1.66
YBX3-210ENST00000540975 EVCP57679 992 aa4.66□□□□□ -1.66
YBX3-210ENST00000540975 ACY1Q03154 408 aa4.66□□□□□ -1.66
YBX3-210ENST00000540975 TWISTNBQ3B726 338 aaPredicted RBP4.66□□□□□ -1.66
YBX3-210ENST00000540975 C17orf107Q6ZR85 190 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms