RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 AGFG1P52594 562 aaKnown RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 NUDT6P53370 316 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 TNFRSF17Q02223 184 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ELP6Q0PNE2 266 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 TPSAB1Q15661 275 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 PPP1R18Q6NYC8 613 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ENPP6Q6UWR7 440 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 LBX2Q6XYB7 198 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 GCNT7Q6ZNI0 430 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 LARP4Q71RC2 724 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CCDC71Q8IV32 467 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SLC34A3Q8N130 599 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 KDF1Q8NAX2 398 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 C19orf18Q8NEA5 215 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 DIRAS2Q96HU8 199 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ASPNQ9BXN1 380 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ZNF214Q9UL59 606 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CDH10Q9Y6N8 788 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 C9orf170A2RU37 121 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 PEX11BO96011 259 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 EGFP01133 1207 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 TMEM11P17152 192 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 WARSP23381 471 aaKnown RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 STOMP27105 288 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 EPHA2P29317 976 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CD79BP40259 229 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SLC19A1P41440 591 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SLC1A3P43003 542 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ASPAP45381 313 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 OAZ1P54368 228 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CASP9P55211 416 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SESN2P58004 480 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ILKQ13418 452 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 RNF212Q495C1 297 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SH3PXD2AQ5TCZ1 1133 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 TRIQKQ629K1 86 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 LRRC66Q68CR7 880 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ELP2Q6IA86 826 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 NAPEPLDQ6IQ20 393 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 KIAA0319LQ8IZA0 1049 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 FSTL5Q8N475 847 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ZNF454Q8N9F8 522 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ATP6V1C2Q8NEY4 427 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 OR5K1Q8NHB7 308 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 APH1BQ8WW43 257 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ARNTL2Q8WYA1 636 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 CREB3L1Q96BA8 519 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 MS4A3Q96HJ5 214 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 PGLYRP2Q96PD5 576 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ZIC5Q96T25 663 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 SYNDIG1Q9H7V2 258 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 OLA1Q9NTK5 396 aaKnown RBP9.11□□□□□ -0.95
CLIP1-214ENST00000540539 MAGEL2Q9UJ55 1249 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 ZNF451Q9Y4E5 1061 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 A0A0G2JMZ2 1700 aa9.11□□□□□ -0.95
CLIP1-214ENST00000540539 COL1A2P08123 1366 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 PCNTO95613 3336 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 UBE2CO00762 179 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 PGAM1P18669 254 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MGAT1P26572 445 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 GNA15P30679 374 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MC2RQ01718 297 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MEF2AQ02078 507 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-214ENST00000540539 OPCMLQ14982 345 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MARCH8Q5T0T0 291 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 AVPI1Q5T686 147 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 BCL2L15Q5TBC7 163 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 SEZ6L2Q6UXD5 910 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 ZNF852Q6ZMS4 543 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 PIWIL4Q7Z3Z4 852 aaKnown RBP9.1□□□□□ -0.95
CLIP1-214ENST00000540539 ATCAYQ86WG3 371 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 HIPK1Q86Z02 1210 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 KLBQ86Z14 1044 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 TRMT10AQ8TBZ6 339 aaKnown RBP9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MRPL38Q96DV4 380 aaKnown RBP9.1□□□□□ -0.95
CLIP1-214ENST00000540539 CAPNS2Q96L46 248 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 PKMYT1Q99640 499 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 OMDQ99983 421 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 GSDMCQ9BYG8 508 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 SLC52A3Q9NQ40 469 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 C1orf112Q9NSG2 853 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 SNTG1Q9NSN8 517 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 PISDQ9UG56 409 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 ERVW-1Q9UQF0 538 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 CRYL1Q9Y2S2 319 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 IQCMA0A1B0GVH7 501 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 OR6C74A6NCV1 312 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 ASPDHA6ND91 283 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 D6RAR5 112 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 H3BM21 787 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 GPR171O14626 319 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 TXNL1O43396 289 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 MBP02144 154 aa9.1□□□□□ -0.95
CLIP1-214ENST00000540539 ANXA6P08133 673 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms