RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ANXA4P09525 319 aaPredicted RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 JUPP14923 745 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 SPAM1P38567 509 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CRYBB2P43320 205 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 ARPC4P59998 168 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CCSMST1Q4G0I0 132 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 LIPKQ5VXJ0 399 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 TMIGD1Q6UXZ0 262 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 NOXA1Q86UR1 476 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 FAM9CQ8IZT9 166 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 FLCNQ8NFG4 579 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 CITED4Q96RK1 184 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 ZNF556Q9HAH1 456 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 A0A075B6Q4 140 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 HMX3A6NHT5 357 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 SAP18O00422 153 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 DPM1O60762 260 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 HBQ1P09105 142 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 ITGA2P17301 1181 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 IDSP22304 550 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 PSPHP78330 225 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 BCL2L1Q07817 233 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 DOC2AQ14183 400 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 FAM131AQ6UXB0 335 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 MED8Q96G25 268 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 GRIP1Q9Y3R0 1128 aa13.35□□□□□ -0.27
SCNN1A-215ENST00000540037 GNG14A0A1W2PPG7 69 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 IGHA2P01877 340 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 NSG1P42857 185 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CDC42P60953 191 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CHRNEQ04844 493 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SCARB2Q14108 478 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 VEPH1Q14D04 833 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 HECTD3Q5T447 861 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 IER5LQ5T953 404 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CAMKK1Q8N5S9 505 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 WDR20Q8TBZ3 569 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 PKP4Q99569 1192 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 RPRD1BQ9NQG5 326 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TMEM39AQ9NV64 488 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 FTSJ1Q9UET6 329 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CLEC4EQ9ULY5 219 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 YARS2Q9Y2Z4 477 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SCN8AQ9UQD0 1980 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SYN3O14994 580 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 C6orf47O95873 294 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CSF3P09919 207 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 RNF130Q86XS8 419 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 GPR65Q8IYL9 337 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC22A12Q96S37 553 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 NMNAT1Q9HAN9 279 aaPredicted RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 C3orf14Q9HBI5 128 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TRPV5Q9NQA5 729 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TMPRSS11EQ9UL52 423 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SMLR1H3BR10 107 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CDRT1O95170 752 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 APOL3O95236 402 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 GADD45GO95257 159 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CAV3P56539 151 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 DUSP7Q16829 419 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TIMM50Q3ZCQ8 353 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 FRMPD2BQ6IN97 320 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 ERAP2Q6P179 960 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 METTL2BQ6P1Q9 378 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 TTC23LQ6PF05 361 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 CHST9Q7L1S5 443 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SLC35A5Q9BS91 424 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 RAB23Q9ULC3 237 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 LSM2Q9Y333 95 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 SNX11Q9Y5W9 270 aa13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 HELZP42694 1942 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-215ENST00000540037 PRRC2BQ5JSZ5 2229 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 B4DXG7 233 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 RECKO95980 971 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 SCG5P05408 212 aa13.33□□□□□ -0.28
SCNN1A-215ENST00000540037 PAX3P23760 479 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms