RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MVKQ03426 396 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 HEPACAMQ14CZ8 416 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 FAM180AQ6UWF9 173 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF438Q7Z4V0 828 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 DTWD1Q8N5C7 304 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 AQP11Q8NBQ7 271 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ABHD11Q8NFV4 315 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SP7Q8TDD2 431 aaPredicted RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF382Q96SR6 550 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 GAL3ST1Q99999 423 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 THG1LQ9NWX6 298 aaKnown RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SLAMF8Q9P0V8 285 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PRSS21Q9Y6M0 314 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MYLKQ15746 1914 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PRSS51A0A1B0GVH4 220 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 FUOMA2VDF0 154 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 OR10H2O60403 315 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CDRT1O95170 752 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 NFATC1O95644 943 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 IFNA16P05015 189 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 LINC00271P0C7V0 271 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CKMT1AP12532 417 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 AGXTP21549 392 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MYF6P23409 242 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ATP4BP51164 291 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 AKR1D1P51857 326 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 E2F2Q14209 437 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 NFKBIDQ8NI38 313 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 RAB8BQ92930 207 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PPP1R16AQ96I34 528 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 C3orf14Q9HBI5 128 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 IL36AQ9UHA7 158 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PRAMEF33A0A0G2JMD5 474 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PRAMEF10O60809 474 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MOSPD3O75425 235 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 HSD17B1P14061 328 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 STAT5AP42229 794 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 XKP51811 444 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 EPHA5P54756 1037 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MEF2AQ02078 507 aaPredicted RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 DUOXA1Q1HG43 343 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 IDNKQ5T6J7 187 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 FAM219BQ5XKK7 198 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 LCN8Q6JVE9 175 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF517Q6ZMY9 492 aaPredicted RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 GAB3Q8WWW8 586 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PIGKQ92643 395 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 TFAP2CQ92754 450 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SCAMP4Q969E2 229 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CPEB1Q9BZB8 566 aaKnown RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CD244Q9BZW8 370 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 OR2AG1Q9H205 316 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 TBCCD1Q9NVR7 557 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF224Q9NZL3 707 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CEPT1Q9Y6K0 416 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 SLC1A7O00341 560 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 MPZL2O60487 215 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ATE1O95260 518 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 BCHEP06276 602 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ACADMP11310 421 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 KDELR2P33947 212 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 OPRL1P41146 370 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 BNC1Q01954 994 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 RHAGQ02094 409 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SUSD1Q6UWL2 747 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 Q6ZVL8 140 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 IQCHQ86VS3 1027 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TCEANCQ8N8B7 351 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 FAM98AQ8NCA5 519 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 OR10H4Q8NGA5 316 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 OR2A12Q8NGT7 310 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SUN5Q8TC36 379 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF597Q96LX8 424 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TRMT61BQ9BVS5 477 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SLC2A11Q9BYW1 496 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 BRINP2Q9C0B6 783 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 MOV10Q9HCE1 1003 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PRDM8Q9NQV8 689 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 WDR37Q9Y2I8 494 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 MED16Q9Y2X0 877 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 GMEB1Q9Y692 573 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 FAM86C2PA6NEL3 165 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 EBLN1P0CF75 366 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CD247P20963 164 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 FSHRP23945 695 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PCSK6P29122 969 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 AVPR1BP47901 424 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CLCN7P51798 805 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ERVPABLB-1P60509 514 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CSTF1Q05048 431 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 LRP8Q14114 963 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PON2Q15165 354 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms