RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 DHRS7Q9Y394 339 aa10.81□□□□□ -0.68
CLSTN3-209ENST00000539982 EPN1Q9Y6I3 576 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-209ENST00000539982 A8MVJ9 347 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 AQP7O14520 342 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 NDUFS4O43181 175 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 OR1F1O43749 312 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 SUSD5O60279 629 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CEP104O60308 925 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ZFAND5O76080 213 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 B3GALT4O96024 378 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ZSCAN5DPP0CG00 497 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ZNF888P0CJ79 500 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CDH1P12830 882 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CNR1P21554 472 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CCND1P24385 295 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 MGAT1P26572 445 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 UQCRC1P31930 480 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CCR8P51685 355 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 GPR143P51810 404 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 HYAL2Q12891 473 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 KEAP1Q14145 624 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 TERF2Q15554 542 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 FLYWCH1Q4VC44 716 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 C1orf185Q5T7R7 199 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 RIPPLY2Q5TAB7 128 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 KIAA0930Q6ICG6 404 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 NEPROQ6NW34 567 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 AGTRAPQ6RW13 159 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 LCTLQ6UWM7 567 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 IL20RBQ6UXL0 311 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ABHD13Q7L211 337 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 PRIMA1Q86XR5 153 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 FAM109AQ8N4B1 249 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ABHD11Q8NFV4 315 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 OR4K1Q8NGD4 311 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 NT5CQ8TCD5 201 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 KCNJ9Q92806 393 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 VMP1Q96GC9 406 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CCDC77Q9BR77 488 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 SGPP1Q9BX95 441 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ATG10Q9H0Y0 220 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 IL1RL2Q9HB29 575 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 DMRT3Q9NQL9 472 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 HPF1Q9NWY4 346 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 SYBUQ9NX95 663 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 ZNF223Q9UK11 482 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 CBLCQ9ULV8 474 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 SOX13Q9UN79 622 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 LIPGQ9Y5X9 500 aa10.8□□□□□ -0.68
CLSTN3-209ENST00000539982 TRBC2A0A5B9 178 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 FAM171A2A8MVW0 826 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 PSMD12O00232 456 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SLC16A5O15375 505 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 OR2J2O76002 312 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 MYO1DO94832 1006 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 IPO7O95373 1038 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SERPIND1P05546 499 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 HEXAP06865 529 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 RNH1P13489 461 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 GABRA1P14867 456 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 MAN2A2P49641 1150 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 NAE1Q13564 534 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SNX1Q13596 522 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SLC10A1Q14973 349 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 XKR6Q5GH73 641 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 WLSQ5T9L3 541 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 ZNF549Q6P9A3 640 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 C4orf22Q6V702 233 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 C16orf47Q6ZP98 133 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 CHSY3Q70JA7 882 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 PIWIL4Q7Z3Z4 852 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 STRA8Q7Z7C7 330 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 CPNE9Q8IYJ1 553 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SYCE1Q8N0S2 351 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 TBC1D19Q8N5T2 526 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 TMEM251Q8N6I4 163 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 UTP15Q8TED0 518 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 NUDT8Q8WV74 236 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 ASB15Q8WXK1 588 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SLCO2A1Q92959 643 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 ALKBH8Q96BT7 664 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 SARAFQ96BY9 339 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 LRRC46Q96FV0 321 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 HES6Q96HZ4 224 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 FAM173AQ9BQD7 235 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 HAUS8Q9BT25 410 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 CNPPD1Q9BV87 410 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 RHBGQ9H310 441 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 ALKBH4Q9NXW9 302 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 ZFP69BQ9UJL9 534 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 PDE10AQ9Y233 779 aa10.79□□□□□ -0.68
CLSTN3-209ENST00000539982 REXO2Q9Y3B8 237 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms